XLOC_033643 (tmem102)


Basic Information

Item Value
gene id XLOC_033643
gene name tmem102
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 22313533 ~ 22325140 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065815
GTGCGCGCAGAGGGACCTGTTGGAAATGACGGGAGCTGAATTCCTGTTTCAGCACAGAAACCACAACAAGCAGCACGGGGTGTGAAGCAGAGAGCAGCGAGCCGGTGGAAAAcaggGTAATGCTCAATGGAGACGCTCATGAGTGCCGTGGCCCCGCGCGCACCGGCGGCGGTGAAGCGGGTGTCCGAGGTGGACTTCCGCTCGGGCACGACTCTGGAGCAGCTGTCGGCTCAGGTGCAGGAGCTCGTTCTGCTGGAACAGGGCGAGTTTGGAGACCAGACCGCGCTCGAGGTGCACACAGCCAAAGACTTCATCTTTAACATGCTGGGCATGGTGCAGAAGGTGGACAAGCGACTGCCGGTTGCCAATGAGTACCTATTGTTGTCAGGTGGAGCCAGGGAAGGTGTTCTTGACCTTAATCCAGAGGACCTAGGTGACTACGCCAAAGGTGTTGACTTTGATTTGGACTTCACTCTGCTGGTGCCTGCTCTTAAACTTCATGACCGCAATCAGCCTGTGACGCTGGACATGAGGCATTCCCCACCATGCCATTCATGGCTGAGCCTGCGCCTCTGCGACCCTACAATGCTGGCGCGTTGGCATATCTGCTGTCAAGACGAGAATAATAGAGATAATAAAGATGAGGAAGAAGATGAGGAGGATGAAACTGGTGCTCTACGAGGTTCAATCCCATCCCTGCAGCCTCCTCAGTCATTAGATGGATGCTACTTCTCTCCATTATTGGTCGCTGATTGGTTCTGGAGTGTAGTTGTGACGGCAGTAGAAGAGTTGCGACAGAATCCTCAAAGAGGGATTCCTGTTCCTGATCGCGTGGAGCGGAATGGGCCACTAACAACACTGATTCTCACTGCAGGAACTAGCCGTATTCTCTACGATCTGCTTCCGGTGGTGTCGTTTCGAGGCTGGCCAGCTGTCGCACAAGGCTGGCTCACAACCAACCATTTCTGGGATGGCAAAATAACAGAGGAGGAGGCCATCAGTGGATTCTATCTGCTTCCGTGTTGCTCTCCAGCTGTCAGCTCCTCAATCAGACCTGACCGCGAATGGAGACTTGCCTACTCCCGCAGCGAGGTGCAGCTAAAGAAATGCGTGCCCTACCCAATGGCACAAGCCTTCCAAGCAGCTAAAGCTGTACTGTCAAGACTTTTAGCTCGCCCTCGCACTGGTCTTAGCCTCTACCACCTACGTACCTTAATGTTTTGGGCATGTGATCGCTTGCCTTCTACGTACCTTAGTTGTCCAGATCATGAGACGCCTGCACGGCTGTTTCTCGGTCTTCTTGATGACTTGGCTCACTGTATTCTGGGCAAAAACTGTCCTAATTACTTCCTTCCACAGTGCAACATGTTAGAGCACCTCTCGGACAGTGCAGCCCTGTTAGTTGCACGGAAACTTGCACATTTACGCTCTGATCCTGCAGAGCACTTAAGAGCAGCTTTGGATCAGGCACAACAAGCATGCCAACTCAAACGTGAGGCTGCTGGAGCTGCTAGTAATGGCAATGGGCTATCTTCACCAAGCCAAGCATATGGTGCTGGATCACCACAAGATGACCGGCTAGCACAACGACTGCAACAACTGGTGACGGAAAACCCTGGCAAGTCTATTTCCGTTTTCCTCAACCCAGATGACGTAACACGTCCGCATTTCCGCATTGATGACAAGTTCTACTGAGCAGACTGGTTTACTCACTGCCAAGGGTACAGAAACCATAGACAACAGAATTTATAGAGGACATAATCATGCCACTTGGCTTCTGTATTTAACCAAATCATCTCCACAGAGAGTTTTCCCTCTGACTTGCTCGACAAGGCTGACTACAATCAAAGCTCCTACTTGACACTCCATTGTCACAAATGTCAGGAAGAACAAAAGTAACAGGGGAAAGGATAGAATTTAGAAGCAACTCACACCTATCCTGATGAAATCCCAATTGACTGACTGCACATCAAGTAGATATGATCCAACGATACTATTCTGTAGAGTTTGATGGTTGTTTTTACCTACTACTCAGTACTACTAAGAATAGACACTGCTTCTGTTTTCTGCTGTATTTCACAGTGAATCCCGAGGGCAGTAAAACTGGAAAACCAACTAGGCCAAGGTACAATATGATGAAActgaatgtaattttattatttttttggtatgTGTGGGAGAAGTTTGTGACTATTGATCGCATAAGCTTCTCTTTCTTCAGTCTGTCAGTTACCCTGCTTGCTTCCCCTTCTCAGgtactttttatttctttcaacTGCTGAGTTTTGAGCCGTTCTAAAgtcaaaaacaacaaaagcagAAAGTGAGGAAAAAGACTAGGACAAACTCTCAAATCCATGCCTTGACGTTTAAGAAGCTGTTGTACAGCCGTAGATACAATCTTTTTGAAGCAAATACTGTTCAaagatatttttgtttacttAGATTTAGAAGTTCGACACTGATGACAGTCTCTGAAACTTGATATAATATTTTAGATTCTGGTTAGCGATTGATTGACCTGATGATTAATTCTGATTGCGCATCCTCTTGGTTTCTGATTTGATTCTAATCTGCAATTGAAGAGTATGTGTTAGTGTTATTCTAAGGGCTTTACTTTGTCAATCATTGTTGCATATTTCCAGAACAAAGGATTTGCGAAAGATGCTTTGGAAAGTGGGGTTTTGTGATGATAAAGGTTTGCCAACACTGTGCACTGGAATTAGATCTAGTGCAGGCAACACTAGAGAGATTTAGCGAAAGGATTGAGAGAATGTGTAAACAAACACATCACTTTTTTTGGTATGTTTGCGTTTGAAAGGGTTCTTCGGTATCTGGCTTTTGCAGATTTGCATTGGTAGCTCCGGGAGGCAGAGATGGATGGAGAAAGTCAAACGCGACGTCCACGGGATAGATTAGGCCGAACCAATGGGACTCGCTGGACCGCAGACATCTGCTCGCCCTCACTCATTGTCGCTTTCTGTCTCCTTCTTAAATCCTTCCCTCTACATCGGCCTCCATCTCTGGCTGTTCTTTATCCATCTCTACCTTCTTGACTGCGCTCAAGGATTAAAGAACAATGTTACATGTGTATTCAGCGTAAATCGCATTAGCGCCCAGTGGGAGTTGGCAGAGTTTCCATGTGTGCTGCTGACATGGCTGCTACGCCTATAGAGAGCAATCAGCAACAGCGTTGCCTTTGAATGACAGCAAAATGGCAAGGATAAAGCTTTTTCTAGaatatttcttatttaattatGTGCTACTGAGGAGAGTTGCTTATGATACAGGTAGGCAACTAAACATTTGTCTGCTGTATGGCAAGGAAAAGACACCAAAGAGAGGTTTGAAAAGGTGAAATATCATGAGTTCTTAAAGAAAGCAAATGTATCTCTGTGGATATAGTCAGGGTTTGACACTGTATACCTTAAAAGGCCTATTTAGTGGGTTAATATCATAAAATGCTTGAATCAATATTCGTaatgctgttttaaatgtttttctgcGTATATTATGAGCGTTGTTTAGCACAATATCTGATATCAAATGAACAGTGGTACTATGCAAGATTTCAGAATCATCTCTGTGATTGAGATATTAAGGCCTACCGTGGCTGTTATAATTACCAAGAGTGTTTTATACAGTGATTtcattgggaaaaaaaattatcgGTGTCAGGGCATGATGAAATGTTCCGGATGCATTTCAGTTTAAGAGTCTGAAGGAAGccaaaacacatttgttttccTTCCTTGCTTTGTAATGATGTGGTCCCAGTGTTTCTTGATCTGACAGCATAATCCCTTGGGTCAtgccgtgtttttttttttattgtttccccctaaactgaaaagaaaatacgAATGTAAACATATTTTACCTCTTCTGTTCAATAAAATCACACTCCCTGAATGGACGCAGAATGATGCATATTTAAATGGTACCAAATAttcatgtttcattttatttatcgattgtgcctcagaaggcatttaattattaatttttttaagtaatggtGTGAAGATGCTGGTCAtagcatgaaataaaaatattagatcaAGATCGCAA

Function

symbol description
tmem102 Orthologous to human TMEM102 (transmembrane protein 102).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-160728-39 Orthologous to human TMEM102 (transmembrane protein 102).

Ensembl:

ensembl_id ENSDARG00000087162

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065815 True 4071 mRNA 0.44 3 22313533 22325140

Neighbor

gene id symbol gene type direction distance location
XLOC_033642 tmem256 coding upstream 4501 22293894 ~ 22309032 (+)
XLOC_033641 si:dkey-85k7.12 coding upstream 374372 21929461 ~ 21939161 (+)
XLOC_033640 ufsp1 coding upstream 394656 21917857 ~ 21918877 (+)
XLOC_033639 pop7 coding upstream 425012 21887307 ~ 21888521 (+)
XLOC_033638 NA coding upstream 439187 21859218 ~ 21874346 (+)
XLOC_033644 fgf11a coding downstream 5326 22330466 ~ 22525531 (+)
XLOC_033645 NA coding downstream 113307 22438447 ~ 22537335 (+)
XLOC_033646 chrnb1 coding downstream 218823 22543963 ~ 22580026 (+)
XLOC_033647 chrnb1l coding downstream 260307 22585447 ~ 22608687 (+)
XLOC_033648 cldn7a coding downstream 291072 22616212 ~ 22626853 (+)
XLOC_033636 NA non-coding upstream 482252 21820301 ~ 21831281 (+)
XLOC_033632 NA non-coding upstream 999849 21096126 ~ 21313684 (+)
XLOC_033629 NA non-coding upstream 1397621 20911912 ~ 20915912 (+)
XLOC_033628 NA non-coding upstream 1404872 20869043 ~ 20908661 (+)
XLOC_033649 BX649313.1 non-coding downstream 306909 22632049 ~ 22655452 (+)
XLOC_033650 NA non-coding downstream 312069 22637209 ~ 22639374 (+)
XLOC_033665 BX957325.1 non-coding downstream 688806 23013946 ~ 23153185 (+)
XLOC_033666 CR352332.1 non-coding downstream 959895 23285035 ~ 23285151 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000344_02974231_02981877 TMEM102 coding CI01000344 null 2974231 ~ 2981961 (+)