XLOC_033651 (ponzr5)


Basic Information

Item Value
gene id XLOC_033651
gene name ponzr5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 22657566 ~ 22663971 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065827
CTGCAGTGTTGATGGAGTGTCAGGTGGAGGGTCATGGGTGTTTTCCACATGCAGTGACACACCACTTACCTGACCAGTGACTTTCGGGAAGTACTTAAATGGAGATGCAATCCTACTCATATCTTTTCACGGGACTTTCTTAACAGTTGATCTCCATCCTTTCACTGCCATCATTTAATCTCAAATTCAGGATTACGCAATAAACAGAATGACCACTCAGCAGCCCGGGCAGTTTATGATAGCACAGACCAATGACCAGTGGAGCTCTGGAATCTGCGACTGCTGTGACAATGTGCCCGAGTGTTGTTTCTCATTCTGGTGTTTTCCCTGTTTTGCCTGTTCGACGGCTCGTAAGCACGGCGAGTGTCTATGTTTGCCGCTCCTCGATGGATTTGGCTTCATTCCTGCAATAACTCTGGCCATGCGCGTGTCAGTGCGCAGTCGCTATGGAATAAAGGGCTCTATCTGTAAGGACTGTGCTTACTCCACTTTCTGTGGAGCTTGCTCCTGGTGCCAGATTTCTCGAGAAATGAACATCCGAGAGCAAAGTTTGACATTTGTCACTCATCGagcaaaataacataaaattttattttatttcgacCGTCCGCCTTGTTTTCCTCAGTATTTAGCAGTAACAATAGTCACCTGAAATAACTCTTGTCATCTGTCATTTGATCTGCACCATTCTtccagttaataaaaaaaatttgttc
>TCONS_00065828
TCTTTTCACGGGACTTTCTTAACAGTTGATCTCCATCCTTTCACTGCCATCATTTAATCTCAAATTCAGGATTACGCAATAAACAGAATGACCACTCAGCAGCCCGGGCAGTTTATGATAGCACAGACCAATGACCAGTGGAGCTCTGGAATCTGCGACTGCTGTGACAATGTGCCCGAGTGTGAGTCTCTCTCACTCATTCTTTCAGTCTTGTTGATTTTGGTGTGTCTCTGTGGGTGTATTTTCTTAAAGAATGTCACTTTTGATGCAGCGCACAATAGCATTGTTAAAACTAGTCTTGCATTGCTGGGATGTGTGTATAAAGGGAACACCAGAGGAGTGCCAGTGCATTTCTGAGAAAGAGAAAAGGCCACTTTATTTTGTGATCATTAATggtttactgtacattattactGTAATAATGCTTTTCTGTTGCTATTAACACTTTAAGGTGAACTACACTATTGGACTGAACATTGCTGGCATTAGTTCACAAATCTGATTCAGTAGTTTCTAGTAGGAGGCAGCAGAGTTGTATCCATACATGCTGCTAAAACTTGAGagagtttgtattttatttaaagggatagttcacccaaaaaaggaaaattatgtcattatttactcatccctTACTTGTCACAcatctgtttgagtttctatcttctgtttaatacaaaagaagataattagaagaaagttgaaaaccggtaaccattctGAGTCAGTGGTTAccttttttcaacattcttctaaatatcttatcttgtgtttaacagaaactgATAAAGGTTTGTAattacttgagggtgagtaaatttgggagtgtactttttatttaatgcctGGGAATGTGTGATGTGTGTAAGTTTGTGAGCTTTGGGCAAACACTGCCACCTAATGGCTACTCCGGGCAACAGCCTGAAGGTTAGTTAAAGGCAGGGGTGCCCTCTAAAGTTTTTCCtctaaagggccaaaaaccaaacttgattgagggctgcg

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-325 No description available

Ensembl:

ensembl_id ENSDARG00000055046

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065827 False 716 mRNA 0.45 4 22657566 22663971
TCONS_00065828 True 1002 lncRNA 0.39 2 22657687 22660249

Neighbor

gene id symbol gene type direction distance location
XLOC_033649 BX649313.1 coding upstream 2114 22632049 ~ 22655452 (+)
XLOC_033650 NA coding upstream 18192 22637209 ~ 22639374 (+)
XLOC_033648 cldn7a coding upstream 30713 22616212 ~ 22626853 (+)
XLOC_033647 chrnb1l coding upstream 48879 22585447 ~ 22608687 (+)
XLOC_033646 chrnb1 coding upstream 77540 22543963 ~ 22580026 (+)
XLOC_033652 ponzr3 coding downstream 11504 22675475 ~ 22677211 (+)
XLOC_033653 ponzr4 coding downstream 16589 22680560 ~ 22684292 (+)
XLOC_033654 ugt5g1 coding downstream 24810 22688781 ~ 22696987 (+)
XLOC_033655 si:dkey-165a24.9 coding downstream 38253 22702224 ~ 22712827 (+)
XLOC_033656 fxr2 coding downstream 54280 22718251 ~ 22761090 (+)
XLOC_033645 NA non-coding upstream 120231 22438447 ~ 22537335 (+)
XLOC_033638 NA non-coding upstream 783220 21859218 ~ 21874346 (+)
XLOC_033636 NA non-coding upstream 826285 21820301 ~ 21831281 (+)
XLOC_033665 BX957325.1 non-coding downstream 349975 23013946 ~ 23153185 (+)
XLOC_033666 CR352332.1 non-coding downstream 621064 23285035 ~ 23285151 (+)
XLOC_033668 dre-mir-730 non-coding downstream 698191 23362162 ~ 23362245 (+)
XLOC_033670 NA non-coding downstream 899777 23563748 ~ 23564568 (+)
XLOC_033672 NA non-coding downstream 1084508 23748479 ~ 23757190 (+)

Expression


Co-expression Network