XLOC_033750 (tp53i11a)


Basic Information

Item Value
gene id XLOC_033750
gene name tp53i11a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 26649319 ~ 26704609 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00066017
GGTTTTTCGATAGTCACAACTGTAGCCCACGAGCGCGCTACATCCAGGCAGCAAACAACAGATTGTCTGCGAGAACAAGTCTCCTTGACAGCTCTAGAAGTGCCGCTTTACTCCTCTATCATGGCCTCCACACCTCCACCCCTCATGAAGAAGCACAGTCAGACAGACCTGGTGAGTCGCCTCAAGTCCCGCAAGGTCCTGGGTGTCGGAGGAGAGGACGATGATGGAGAGGTGCACAGGTCAAAGATCAGCCAGATGTTGGGCAATGAGATAAAGTTTGCTGTTCGTGAGCCCATTGGCCTTCGGCTTTGGCTTCTCGTCTCTGCTGTGCTGTTCACATCAACATCCTTAATGGCTTTGGCTTTCCCCAACCAGTTCTATGAGATCATATTTGAGCTCACCACCACCAGGGTCTCCATCAGACTCTACGGAGGAGCCCTTCTATGCATCTCATTAATCCTGTGGAATGGCTTGTACACGGCGGAAAAGGTCATCATTCAGTGGACGCTGCTAACAGAAGCATGTTACTTCGGGGTACAGTTTCTAGtgacgTCCATCACCCTGTTGGAGATGGGCATCTTGTCCAACAGTGCAGTTGTTCTTCTTCTCATTGAAGCTTCCTTCCTCTTCATCACCTTGAGTTACTATCATTACCTCGGCCGACGCCCTAAGAAGATCTGATGGAGTTTGATCACCGATTTGGCAGAGTCTGTTAGATGTGTGGCTTGGCACCACTGAATGCTTTGAATACAGTAGCATCACTGCCTGGACCAAACGAATTTACACTTGACTGAAAATC
>TCONS_00066018
GGTTTTTCGATAGTCACAACTGTAGCCCACGAGCGCGCTACATCCAGGCAGCAAACAACAGATTGTCTGCGAGAACAAGACCTCAGTAGATGGTGGAATGCGTATCTGAGAATTTACAGGAACGCACTGGACCATATGTTCAGAAAGTGGGATTTTTGAGTTCTGCGTCCATCTCGCTTCAGTAGAATCTCCTTGACAGCTCTAGAAGTGCCGCTTTACTCCTCTATCATGGCCTCCACACCTCCACCCCTCATGAAGAAGCACAGTCAGACAGACCTGGTGAGTCGCCTCAAGTCCCGCAAGGTCCTGGGTGTCGGAGGAGAGGACGATGATGGAGAGGTGCACAGGTCAAAGATCAGCCAGATGTTGGGCAATGAGATAAAGTTTGCTGTTCGTGAGCCCATTGGCCTTCGGCTTTGGCTTCTCGTCTCTGCTGTGCTGTTCACATCAACATCCTTAATGGCTTTGGCTTTCCCCAACCAGTTCTATGAGATCATATTTGAGCTCACCACCACCAGGGTCTCCATCAGACTCTACGGAGGAGCCCTTCTATGCATCTCATTAATCCTGTGGAATGGCTTGTACACGGCGGAAAAGGTCATCATTCAGTGGACGCTGCTAACAGAAGCATGTTACTTCGGGGTACAGTTTCTAGtgacgTCCATCACCCTGTTGGAGATGGGCATCTTGTCCAACAGTGCAGTTGTTCTTCTTCTCATTGAAGCTTCCTTCCTCTTCATCACCTTGAGTTACTATCATTACCTCGGCCGACGCCCTAAGAAGATCTGATGGAGTTTGATCACCGATTTGGCAGAGTCTGTTAGATGTGTGGCTTGGCACCACTGAATGCTTTGAATACAGTAGCATCACTGCCTGGACCAAACGAATTTACACTTGACTGAAAATCAGCCTCTGTTTGTGAGCAGTTTTCCCTTTTATGTAAGTACAGCATTTGGGTGTTTACTCTCATTGGCTAACGAGGACCAGAGAATCACGACTGTTGTTTTAGTTACCTTGTTCACGTAAGTGTCTTTCGTTATCTGACCTGTTTGTAAAAAGCCTTTTCTGAGAGCATATTGAATGGAGAGTAGATTTATTGCACATGTCAGAGAATCCTGTCTCCCAAATGTATCACATTGTTTTGGGAAGTTGCCCACAGTTCAGGTTGTATAATGTAAGAGTTTGTGAAATTCCTGAATGTGGTGTGGCTTTCCGCGACACAaaaattggtttatttatttatttttagttgtcaGGCACAAGCGTAGACACAGCGTAGCACAGAATATATGTTAAAAATGCAAGAAAAAGTGTAAACCAAGGAATTTCATACAATTCAAATGTGTTTTAGGAGAAATAGAGTGGTTACATTTACATTACTAAGATTTTAAATggattattttgttcattttattataaaGTGGGAATTAAAATTCCAAAGTGAGGTCTGCAGATATACTGTTGTGGAATTTAGACTCCCAGCAGTACATATTGTCATATGGTAAGGAATAATGGATGtagtattaaatacaatttaatgtgtGTATTTCAGAAAGTATCTCATTAACTTTGACTGTCTGTAGCAAAGTCAGctctgtgtttttttaaacaagaaaattCCACAGTATACAGTATACCTAATGGACAGTTTTCTAACAGTTACTACAGTGAATAGTGTTGTTTATTAACTAGTCCCCTTTAATTGTAGatttaaaacattaagaagaatAAATTAGTTGTCAAATTTATTTTTGGTTatgctttattttacagtgtCTTTGTTACAGGGGAGTATACCCATGGGTCCAAccaaatttttttgttatttctgtgcAAGGTTTGTCAAAAATCTTTGGATTTATGTGTATTTTTGATGGTATAGGAGCTGAAACGTAATAATAAAAATTTCTTTCACTTTTaaggtttaaaatgcaaatagaaTAAGAATggcttgtttggtaaacaaagctacaGTAAGTCTCTGATGTAACCCATCCAC

Function

symbol description
tp53i11a Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TP53I11 (tumor protein p53 inducible protein 11).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050306-58 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TP53I11 (tumor protein p53 inducible protein 11).

Ensembl:

ensembl_id ENSDARG00000069430

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00066017 False 799 mRNA 0.50 7 26649319 26703517
TCONS_00066018 True 1999 mRNA 0.40 8 26649319 26704609

Neighbor

gene id symbol gene type direction distance location
XLOC_033749 hsbp1a coding upstream 15258 26629084 ~ 26634061 (+)
XLOC_033748 NA coding upstream 33149 26611727 ~ 26616170 (+)
XLOC_033747 tnk1 coding upstream 84535 26545502 ~ 26564784 (+)
XLOC_033746 NA coding upstream 106896 26534014 ~ 26542423 (+)
XLOC_033745 mpdu1b coding upstream 175836 26466826 ~ 26473483 (+)
XLOC_033751 cd82a coding downstream 4642 26709251 ~ 26739674 (+)
XLOC_033752 CR394555.1 coding downstream 45862 26750471 ~ 26756182 (+)
XLOC_033753 tspan18a coding downstream 58108 26762717 ~ 26837282 (+)
XLOC_033754 ext2 coding downstream 139652 26844261 ~ 26892613 (+)
XLOC_033755 caprin1a coding downstream 293560 26998169 ~ 27021303 (+)
XLOC_033744 NA non-coding upstream 254936 26388429 ~ 26394383 (+)
XLOC_033742 NA non-coding upstream 352807 26296277 ~ 26296512 (+)
XLOC_033741 NA non-coding upstream 358850 26285655 ~ 26290469 (+)
XLOC_033757 BX927397.1 non-coding downstream 339106 27043715 ~ 27043842 (+)
XLOC_033758 NA non-coding downstream 339920 27044529 ~ 27048457 (+)
XLOC_033762 BX005056.2 non-coding downstream 1093212 27797821 ~ 27799035 (+)
XLOC_033764 NA non-coding downstream 1117835 27822444 ~ 27832323 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000026_02692703_02703519 TP53I11, TP53I11A coding CI01000026 null 2692703 ~ 2703741 (+)