XLOC_033837 (mettl15)


Basic Information

Item Value
gene id XLOC_033837
gene name mettl15
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 32021669 ~ 32142810 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00066197
TTTCTTCCGGGAGCTGTCAGAGCTGCACTCGTGAACCTactacagtacacacacatcgcTAAAGAAGCAACGCTGTTTAATACTTACCGATCTATATGCCCCAATATTATAGCTGCTTCATGGCTGCACCCTGCAGACAGACTTTGGGAGTTTGGAAACACGTGGCTACTCTCCGAAACCCCAGAATGTTCAGGAGGTGCTGGAGAAAGTCGTGGCATCCAGGGAGACTCTATACTGGATCAGTCCCTTCAAGCCCCGATTGTGAGATGCCAGTCCAAGAGGAGAAGCCCTTTCACACACCGGTCATGGTGAAGGAAGTGCTGCAGTTTCTGAACATCAAACCTGGACAGATTGTTCTGGACTTAACCTTTGGGGCCGGAGGTCACTCGAAGGCAATTCTGCAGTCAGTTCCTGGTGTAACGGTGGTGGCTGCAGATCGTGACCCCACAGCTTTCCGAATGGCCCAACAATTAGCTGAAGAATACCAGGGCAAAGTGAAGCCAGTACTAGGGAGGTTCAGTGAGCTGAATAACCTGCTCCCAGCATTGGGTTTGGGTCCTGGGACTGTGGATGCTGCTCTCCTGGATGCCGGTTGCTCCTCCATGCAGATGGATTCAGCAGAAAGGGGCTTCTCCCTCAGCAAAGACGGACCGCTAGACATGAGGATGGATGGAGACAGGTACCCCGACATGCCCTGCGCCGCTGACGTGGTCAACGCCTTAGATCAACAGGCGCTTGCGTCCGTGCTGGCCGCGTACGGGGAGGAGCGGCACACCAGGAAAATTGCGGCGGCCATCGCACAGGCACGCAGCGTCTACCCCATCGGCCGGACCCTGCAACTGGCCAGCATCGTAGCAGGTGCGTTTCCAGCCAGTGCGTTGTATGCCCGGCGTGATCGCCTGCAGCGGCCCTCACATGTTGCCACCAAAACCTTCCAGGCCTTGCGGATATTTGTGAATGATGAGCTGAACGAGCTTCATGCTGGCCTGCGTGTGGCCCAGACTCTGCTCCGTCCCAAAGGCCGACTCTGTGTTCTCACCTTCCACTCCCTGGAGGACCGTCTGACCAAACGCTTCCTCCGCGGAGAGGACCTGGCCGCTCCACCACGCCGCAGCCTTCGCCAGCATGCCAGAGCCAGGCCAGCAGGTCAGGAGGAGGAGTTtgaagaggaggaagagggtGACGAAGGAGGGAATAGTGTGCATTGGGTCAGTCTGAAGAAAGTGATAAAGCCAAGTGAAGAGGAGGTGCAGGAGAACCCAAGAGCTCGATCTGCCAAACTCAGAACAGCAGTGAGACAATAGAGGACCATGCAAAGACtctgaaatgcttttttttttactgattgcTAATTTAACTTTTTCATGTGTGGTTGGGCTCAGATCAGGGTGATTCATTTTGaaatagtacaaaataaacaatagaagAGCAGAATTTGTTTTTCTGATTTGTTGATGAAAATGTTGGTGGCGTAGGCTTGAATTCTGGATGCATTTCATGTACTCAATGTTCAGTTCATGAACACTTTACATATCTGGCTGAGGGGTGGCTTTGCTAATTTTTCCTTATTATATTTCatgttttgatttcatgtttTGTATTagctttattaagttattttcgATTatttttctctgttgttttttcagatgttgcttcggtttattttttgtttctctatttTTTGTAgatgtgtattattttatttaactacagTCATTACAGTCTGGTGATTCtgctaaaatataaattaattataaagtgaaaattattttggttcattCAGATATATGTTAAtggaaaacaataaatatttaaaaaatt
>TCONS_00066198
CCCTGCTCTGGCACGTGTCCGTCTATCTAGCGGGGATTTCTCAATTATAGATGCAGAGACATTTGCAAATTAGAAAATGATGGGATCTATATGCCCCAATATTATAGCTGCTTCATGGCTGCACCCTGCAGACAGACTTTGGGAGTTTGGAAACACGTGGCTACTCTCCGAAACCCCAGAATGTTCAGGAGGTGCTGGAGAAAGTCGTGGCATCCAGGGAGACTCTATACTGGATCAGTCCCTTCAAGCCCCGATTGTGAGATGCCAGTCCAAGAGGAGAAGCCCTTTCACACACCGGTCATGGTGAAGGAAGTGCTGCAGTTTCTGAACATCAAACCTGGACAGATTGTTCTGGACTTAACCTTTGGGGCCGGAGGTCACTCGAAGGCAATTCTGCAGTCAGTTCCTGGTGTAACGGTGGTGGCTGCAGATCGTGACCCCACAGCTTTCCGAATGGCCCAACAATTAGCTGAAGAATACCAGGGCAAAGTGAAGCCAGTACTAGGGAGGTTCAGTGAGCTGAATAACCTGCTCCCAGCATTGGGTTTGGGTCCTGGGACTGTGGATGCTGCTCTCCTGGATGCCGGTTGCTCCTCCATGCAGATGGATTCAGCAGAAAGGGGCTTCTCCCTCAGCAAAGACGGACCGCTAGACATGAGGATGGATGGAGACAGGTACCCCGACATGCCCTGCGCCGCTGACGTGGTCAACGCCTT
>TCONS_00066199
GATTCATTTCTAACGTTTGCATATtaacaacatgtttacatgctTAAACAATTTGTATTGATCTATATGCCCCAATATTATAGCTGCTTCATGGCTGCACCCTGCAGACAGACTTTGGGAGTTTGGAAACACGTGGCTACTCTCCGAAACCCCAGAATGTTCAGGAGGTGCTGGAGAAAGTCGTGGCATCCAGGGAGACTCTATACTGGATCAGTCCCTTCAAGCCCCGATTGTGAGATGCCAGTCCAAGAGGAGAAGCCCTTTCACACACCGGTCATGGTGAAGGAAGTGCTGCAGTTTCTGAACATCAAACCTGGACAGATTGTTCTGGACTTAACCTTTGGGGCCGGAGGTCACTCGAAGGCAATTCTGCAGTCAGTTCCTGGTGTAACGGTGGTGGCTGCAGATCGTGACCCCACAGCTTTCCGAATGGCCCAACAATTAGCTGAAGAATACCAGGGCAAAGTGAAGCCAGTACTAGGGAGGTTCAGTGAGCTGAATAACCTGCTCCCAGCATTGGGTTTGGGTCCTGGGACTGTGGATGCTGCTCTCCTGGATGCCGGTTGCTCCTCCATGCAGATGGATTCAGCAGAAAGGGGCTTCTCCCTCAGCAAAGACGGACCGCTAGACATGAGGATGGATGGAGACAGGTTGGACCACATTAGTAGAAACACCTATTGTGCTTTTGTTCCAAAAAAATAATTTGTGCTATTAGTAATGGCAGATTCCCTCTCAATATACACTGATGGCCACAGTTATTAATCTTGGCTCACTCTGTTATTGATTACATCTACAGAGTTTCCATGCTTCTCTATTATAGCTATTTAAAACTAATTCTGAACAGCTGTAAGGCATAATCTAATTATAGCTTAATACAATAAAACGATGACT

Function

symbol description
mettl15 Predicted to enable methyltransferase activity. Predicted to act upstream of or within methylation. Orthologous to human METTL15 (methyltransferase like 15).

GO:

id name namespace
GO:0008168 methyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-130530-958 Predicted to enable methyltransferase activity. Predicted to act upstream of or within methylation. Orthologous to human METTL15 (methyltransferase like 15).

Ensembl:

ensembl_id ENSDARG00000089236

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00066197 False 1824 mRNA 0.48 6 32021669 32142810
TCONS_00066198 False 716 mRNA 0.53 5 32021982 32121736
TCONS_00066199 True 891 lncRNA 0.46 4 32022086 32116953

Neighbor

gene id symbol gene type direction distance location
XLOC_033836 NA coding upstream 45709 31927988 ~ 31975960 (+)
XLOC_033835 mybpc3 coding upstream 121744 31838320 ~ 31899925 (+)
XLOC_033834 eif3jb coding upstream 589566 31425976 ~ 31432103 (+)
XLOC_033833 strc1 coding upstream 596213 31395525 ~ 31425456 (+)
XLOC_033832 ctdspl2b coding upstream 626158 31374383 ~ 31395511 (+)
XLOC_033838 NA coding downstream 27389 32170199 ~ 32171758 (+)
XLOC_033839 lgr4 coding downstream 226216 32369026 ~ 32460223 (+)
XLOC_033840 NA coding downstream 319833 32462643 ~ 32472938 (+)
XLOC_033841 BX511109.1 coding downstream 332533 32475343 ~ 32491150 (+)
XLOC_033842 fshb coding downstream 462895 32605705 ~ 32612560 (+)
XLOC_033822 AL935053.1 non-coding upstream 1545287 30475836 ~ 30476382 (+)
XLOC_033821 BX957301.1 non-coding upstream 1582648 30438905 ~ 30439021 (+)
XLOC_033814 NA non-coding upstream 1904561 30094809 ~ 30117108 (+)
XLOC_033813 NA non-coding upstream 1945497 30072878 ~ 30076172 (+)
XLOC_033844 AL929252.1 non-coding downstream 538830 32681640 ~ 32681755 (+)
XLOC_033853 BX571811.1 non-coding downstream 1026109 33168919 ~ 33171622 (+)

Expression


Co-expression Network