Gene
RNA
| Item | Value |
|---|---|
| gene id | G1457214 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 48383731 ~ 48383983 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1667133 | True | 253 | lncRNA | 0.33 | 1 | 48383731 | 48383983 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tpgs2 | tpgs2 | coding | upstream | 29673 | 48348965 ~ 48354058 (+) |
| LOC110494009 | LOC106565181 | coding | upstream | 54285 | 48307825 ~ 48329446 (+) |
| ubap2a | LOC106565184 | coding | upstream | 148540 | 48194992 ~ 48235191 (+) |
| dcaf12 | LOC106565186 | coding | upstream | 204468 | 48152982 ~ 48179263 (+) |
| ubap1 | LOC106565187 | coding | upstream | 236487 | 48103537 ~ 48147244 (+) |
| LOC110494013 | LOC106565177 | coding | downstream | 5110 | 48389082 ~ 48424478 (+) |
| LOC110494016 | LOC106565178 | coding | downstream | 125894 | 48509877 ~ 48515292 (+) |
| LOC110494018 | LOC106565175 | coding | downstream | 195327 | 48579310 ~ 48583667 (+) |
| LOC110494023 | LOC106565171 | coding | downstream | 248169 | 48632152 ~ 48634553 (+) |
| bap1 | LOC106565169 | coding | downstream | 293024 | 48677007 ~ 48690097 (+) |
| G1457210 | NA | non-coding | upstream | 8559 | 48374951 ~ 48375172 (+) |
| G1457158 | NA | non-coding | upstream | 113685 | 48269373 ~ 48270046 (+) |
| G1457157 | NA | non-coding | upstream | 114850 | 48268622 ~ 48268881 (+) |
| G1457156 | NA | non-coding | upstream | 115639 | 48267876 ~ 48268092 (+) |
| G1457155 | NA | non-coding | upstream | 115998 | 48267420 ~ 48267733 (+) |
| G1457215 | NA | non-coding | downstream | 3019 | 48387002 ~ 48387756 (+) |
| G1457188 | NA | non-coding | downstream | 72837 | 48456820 ~ 48472295 (+) |
| G1457311 | NA | non-coding | downstream | 191016 | 48574999 ~ 48575223 (+) |
| G1457973 | NA | non-coding | downstream | 224237 | 48608220 ~ 48609579 (+) |
| glrx | LOC106565191 | other | upstream | 347148 | 48030892 ~ 48036585 (+) |
| G1456969 | NA | other | upstream | 544361 | 47833580 ~ 47839370 (+) |
| LOC100135862 | LOC106565314 | other | upstream | 576250 | 47805358 ~ 47807518 (+) |
| G1456570 | NA | other | upstream | 1154935 | 47228219 ~ 47228796 (+) |
| G1454824 | NA | other | upstream | 2525230 | 45856249 ~ 45858501 (+) |
| bsnb | LOC106565168 | other | downstream | 309338 | 48693321 ~ 48814670 (+) |
| erc2 | LOC106583361 | other | downstream | 538824 | 48866589 ~ 49040356 (+) |
| G1458807 | NA | other | downstream | 1055023 | 49439006 ~ 49439329 (+) |
| LOC110494957 | qrich1 | other | downstream | 1797182 | 50181045 ~ 50192699 (+) |
