XLOC_034637 (il13ra1)


Basic Information

Item Value
gene id XLOC_034637
gene name il13ra1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 19153320 ~ 19168375 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00067433
GTTGGTTGTCCCTGAAGCTCCACTCACTCCAGTCAGTCGCACTTCTGTTTCGATATTCAGGCAAAGAGGACGCGACTGTGTCTGTCGCACAGTTTGTGTTCACCTACTATGGTGACGAACACAAGTACAACCACCTAAAAACTCAAGTACGACACAGGATTACGACATCTCCTATTGGATTTTACACGGAATATACGACAAAGCAAGTCTTCAACATGATGTATCGATTCCTGGACATTTCCTTGATTGTTTGCTTCTCCGTCTCGCTCATGTTCGTCGGTGTTGAAAGCATGTCAGAGCTTCCTCCGCCGAAGAATCTCAACTTTAAATGGGAAACACCTTTCACGCTTAATTTGACCTGGGACAAGCCGGAGGATTTGGATCCAGAATGTTTGGTGAACTACACAATAAGCGTGAGCTCATCTCTGATCTGTTCTAACAGTAACAGCGAAAAGAGAAGAGTTGCCACCAACAAGGTCTTACTGAACGTCTCCAATGTGAATGGACTGTGTATCAATGTTACTACAAACTTTGACAACTGTGGAGATAAACGGAGCCCACCTCAGATCATCACCATCCCTCCACCTCCAGTGCTGCTGGTGAAAGACAGGGACTTTGCATATTCCCATAACAAGCTGATGTGCACTTGGAGACCTGCTGTTGATGTCAAAGACCTGGGTTTTTATTACTGGGATTCTTCGCTTGAATCACTAATGCGATGTATACCTGATGATACTATGAAGATGGGAGGATGTGTCATACATAACAAACGTCTCaaagaaattaatgtttttagCCAAATGTTCTACCTGTTCAACGGCACTTACAATGGGACTGTTGTAAACAACACCTTCAGGGATGAAAGTGCAATGCAATATGTGAGACTAAAGAAACCTCAGCTTACAGTCCAAAGAGTTGGGGACTCACTCATGTTTCAAACAAATGCATCAGATCTAGACGAGTTTGAAGAAAGTTGCTACAAATACAACTATACATACAACGAGTGTGGAAAGGAATCACGTAACTTCACAGAACACATAAGCAAATCTACAAAACAGTTTGACCAGTACTGCAAGTACAAAGCCAGAGTGCAGATCCATTTCTCAAGCAACTGTGGACGAGGATTTAGTGAACTGAGCGACGAAGTGGAATATGGTGAGAACAGCAATCCAAGCACGCCTGCGTTACTGGCCCTCATCATAATCCCGCTCATGGTTTCCTGTTGCCTGATAGTGTCTCTTGTGCTGCTCAGAAGAAATAAAGACATTCTATTCCCAAAAGTCCCGGGCCCGTCGCTTTTCTTCAAGGAGATGCTCAACAATAGTGCCAGTGGGCCTCAGGGACTACAGGCAAACTCTCCAATGAACATAGTCTATGATCCTACTGAAGAAACCGTGGAATACAATATAATTCTAGAAGACACATCGCTTATGCAGAGTAAGCTGGAGTAAAGGAAAAATCTGAACTATCAGGATGAACTCAGGGTGCGTTGAAAACACTGACACACATGTCTATGAAAGGAAAAGGTTGTCTGATTCATTCGTTGATGAATAATAAGCTCAGGCTCCACCTTTGGACTTCGACCTCACTTATTTTCCTATGCGTTGCCAGTAAATTTGCTCCTCCTGGCACAACAGTGACTGTTTTTTCCTCATTGAATGTATTGTGAAGATAGGAAAAGCAAGCAACAGATCTTCCCAGGGCAGGTTGGTTGGATCTAATTGTCTGGAAATGGACAAGCAATACTGTATGCAGAGGCCAGTGGAGCTCAACACTCATGAAATATGGAAATTGTGaccatctttctttttttgcacaCTGTTTCTAAACTGTTCCATGCTTGCTTGAAATGGCTACTTTATTGATCTGTGGGTGTTTCCTGCACGTTGTTTACAAACTGAACATACTTCTATGGACGTCTAAAGGAAATGCGTTTTTCTGTGCACTGTGAATTGTTACATATGTTAGCGTAAAGTGATGTGGTTTACTCTATACCAGAAAGCTAAAtgtttgttttactgtaaatatgtaattaCGTTGACACTATGGTGAATAAACAAATGGAAATAGAGTTTAGATTAATATTtggacatttaaaataaataaattgcaattatttagttttt

Function

symbol description
il13ra1 Predicted to enable cytokine binding activity and cytokine receptor activity. Predicted to be involved in cytokine-mediated signaling pathway. Predicted to act upstream of or within prolactin signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in external side of plasma membrane. Human ortholog(s) of this gene implicated in asthma and chronic obstructive pulmonary disease. Orthologous to human IL13RA1 (interleukin 13 receptor subunit alpha 1).

GO:

id name namespace
GO:0019221 cytokine-mediated signaling pathway biological_process
GO:0009897 external side of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0043235 receptor complex cellular_component
GO:0004896 cytokine receptor activity molecular_function
GO:0019955 cytokine binding molecular_function

KEGG:

id description
ko04630 JAK-STAT signaling pathway
ko04060 Cytokine-cytokine receptor interaction
ko05200 Pathways in cancer
ko04050 Cytokine receptors
ko04090 CD molecules

ZFIN:

id description
ZDB-GENE-060503-103 Predicted to enable cytokine binding activity and cytokine receptor activity. Predicted to be involved in cytokine-mediated signaling pathway. Predicted to act upstream of or within prolactin signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in external side of plasma membrane. Human ortholog(s) of this gene implicated in asthma and chronic obstructive pulmonary disease. Orthologous to human IL13RA1 (interleukin 13 receptor subunit alpha 1).

Ensembl:

ensembl_id ENSDARG00000080020

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00067433 True 2126 mRNA 0.41 10 19153320 19168375

Neighbor

gene id symbol gene type direction distance location
XLOC_034636 kirrel1a coding downstream 6394 19070464 ~ 19146926 (-)
XLOC_034635 ndufs2 coding downstream 84781 19043750 ~ 19068539 (-)
XLOC_034634 fcer1g coding downstream 109919 19033883 ~ 19043401 (-)
XLOC_034633 CU972454.4 coding downstream 123783 19028827 ~ 19029537 (-)
XLOC_034632 NA coding downstream 137433 19007755 ~ 19015887 (-)
XLOC_034638 dock11 coding upstream 11444 19179819 ~ 19332421 (-)
XLOC_034639 ntn4 coding upstream 165939 19334314 ~ 19369002 (-)
XLOC_034640 si:ch73-71d17.2 coding upstream 228754 19397129 ~ 19420334 (-)
XLOC_034641 NA coding upstream 331605 19499980 ~ 19505267 (-)
XLOC_034642 man2b2 coding upstream 341513 19509888 ~ 19526721 (-)
XLOC_034631 NA non-coding downstream 149787 18990918 ~ 19003533 (-)
XLOC_034630 NA non-coding downstream 233335 18915542 ~ 18919985 (-)
XLOC_034628 NA non-coding downstream 379373 18762947 ~ 18773947 (-)
XLOC_034652 CR339062.2 non-coding upstream 787703 19956078 ~ 19956192 (-)
XLOC_034654 NA non-coding upstream 877012 20045387 ~ 20050795 (-)
XLOC_034656 BX322601.1 non-coding upstream 963961 20132336 ~ 20133863 (-)
XLOC_034657 NA non-coding upstream 1066039 20234414 ~ 20239135 (-)

Expression


Co-expression Network