XLOC_034641


Basic Information

Item Value
gene id XLOC_034641
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 19499980 ~ 19505267 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00069175
TCTGGATTAGACCATTCTTCGAAACATTTAAGATCATGTAAGTAAGTCaattacatattgtgcctttaattcAAAATCTTTGGTACAATTCAGAGGGAATCCTCCTCTGGCCAGGCTACTAAATTGTAACACTAAATCAAATGTTAACAATTTTTAAGTAAACTAACATATTAGGACTGTATTAAGAtagctacatttaaaaaaagggtACAAAAACATGTATTGGTATGTTTTGTCCTGTAACACTGTTTAAGATACATACTGGTAATACATGACTTGTGTTAGTGATATATTTGACTGTGGTATAAAGTATTACTGTAAGTGTATAATATACACACTCTCGCATTCATTCGGAAGCTGCAGGTGGCGTCATAACA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00069175 True 377 lncRNA 0.32 2 19499980 19505267

Neighbor

gene id symbol gene type direction distance location
XLOC_034640 si:ch73-71d17.2 coding downstream 79646 19397129 ~ 19420334 (-)
XLOC_034639 ntn4 coding downstream 130978 19334314 ~ 19369002 (-)
XLOC_034638 dock11 coding downstream 167559 19179819 ~ 19332421 (-)
XLOC_034637 il13ra1 coding downstream 331605 19153320 ~ 19168375 (-)
XLOC_034636 kirrel1a coding downstream 353054 19070464 ~ 19146926 (-)
XLOC_034642 man2b2 coding upstream 4621 19509888 ~ 19526721 (-)
XLOC_034643 CCNB1IP1 coding upstream 33158 19538425 ~ 19544575 (-)
XLOC_034644 oxa1l coding upstream 83341 19588608 ~ 19600181 (-)
XLOC_034645 si:ch211-212k18.13 coding upstream 100563 19605830 ~ 19613388 (-)
XLOC_034646 zgc:194655 coding upstream 108544 19613811 ~ 19614916 (-)
XLOC_034633 CU972454.4 non-coding downstream 470443 19028827 ~ 19029537 (-)
XLOC_034632 NA non-coding downstream 484093 19007755 ~ 19015887 (-)
XLOC_034631 NA non-coding downstream 496447 18990918 ~ 19003533 (-)
XLOC_034630 NA non-coding downstream 579995 18915542 ~ 18919985 (-)
XLOC_034628 NA non-coding downstream 726033 18762947 ~ 18773947 (-)
XLOC_034652 CR339062.2 non-coding upstream 450811 19956078 ~ 19956192 (-)
XLOC_034654 NA non-coding upstream 540120 20045387 ~ 20050795 (-)
XLOC_034656 BX322601.1 non-coding upstream 627069 20132336 ~ 20133863 (-)
XLOC_034657 NA non-coding upstream 729147 20234414 ~ 20239135 (-)
XLOC_034662 NA non-coding upstream 997013 20502280 ~ 20574689 (-)

Expression


Co-expression Network