XLOC_034693



Basic Information


Item Value
gene id XLOC_034693
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 23545693 ~ 23546584 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00069198
CTGAATCACAGCAAGTCTCCTTAACTTTCTCCATtagacatgcacacaaacacacttaaacaGACCTGCTAAAACATGTAGTGACAATAACCATTTCCTGTATCCCTGTGGAGATTGAAACCATTTTCCAGCAAACACACTCACTCGGTTTTAAATTGGCACCTCTTCCAATAGCTGAAGGAGACAATGAAACAGGAGGCAAATGCGTCACAGATTCACGCAGCTGATCACTCCTGTTGGAAGTCACGACAGCGATGGAGACACAGCTGACCTTCCTCAAAAGTTAAAATCAGGTGAAAAAGACATCAGTCACCCTCAGTTCTCTGCCAGTAAATGAGGGACGAAAAAGCAGAAGAGGAAAGCTGAAATGAAGAAAAGTTGGGAGAGTGTACTGTAAATGCAGAGGATCATGCAGCAGCAAAGGAGTCTTCTAAGTGcggatgccctttacatacactctcgcatttatacactatggccatttttACTTaccgattcacctatagcgcatgtctttcggactgtgggggaaactggagccccCAGAGGAAGGAGGAATTCAcaggaacacagggagaacatgcaaactccacacagaaatggcaactggcccagctgggactcgaactagcgaccttattgctgagaagtgacagtgctaaaatgaaaaaaaga

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00069198 True 675 lncRNA 0.45 2 23545693 23546584

Neighbor


gene id symbol gene type direction distance location
XLOC_034692 NA coding downstream 51185 23493425 ~ 23494508 (-)
XLOC_034691 si:dkey-171c9.3 coding downstream 563897 22968756 ~ 22981796 (-)
XLOC_034689 tnfsf10l coding downstream 588804 22911610 ~ 22956889 (-)
XLOC_034690 CR381635.1 coding downstream 608445 22937129 ~ 22937248 (-)
XLOC_034688 si:ch211-15b10.6 coding downstream 755063 22788718 ~ 22790630 (-)
XLOC_034694 gpr185b coding upstream 14451 23561035 ~ 23563092 (-)
XLOC_034695 NA coding upstream 23143 23569727 ~ 23574177 (-)
XLOC_034696 zgc:92429 coding upstream 181184 23727768 ~ 23745984 (-)
XLOC_034697 si:ch211-200p22.4 coding upstream 202387 23748971 ~ 23848012 (-)
XLOC_034698 NA coding upstream 305903 23852487 ~ 23858327 (-)
XLOC_034685 BX470211.1 non-coding downstream 878096 22664936 ~ 22667597 (-)
XLOC_034682 NA non-coding downstream 1300140 22243252 ~ 22245553 (-)
XLOC_034676 NA non-coding downstream 1675341 21843904 ~ 21870352 (-)
XLOC_034701 CR388231.5 non-coding upstream 355900 23902484 ~ 23906493 (-)
XLOC_034702 NA non-coding upstream 399417 23946001 ~ 23949685 (-)
XLOC_034707 CR388231.6 non-coding upstream 512184 24058768 ~ 24069896 (-)

Expression



Co-expression Network