G1643374


Basic Information

Item Value
gene id G1643374
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 58368823 ~ 58369053 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1879967
GGCCATATAGCACAAACCACTGAGGTGCCTTAtttactattataaactggttaccaacacaattagagcagtaaaaattattgttttgttatacgcatggtatacggtctgatacaccacggctgtcagccaatcagcattcaggactcaaTCCACCCAGTTTATATACAGTAATTGACCACAGCAGAGGCTCTAAGCCTCCAGACCTGACAGCAGTGCATTCTGTTTGGC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1879967 True 231 lncRNA 0.43 1 58368823 58369053

Neighbor

gene id symbol gene type direction distance location
dnaaf2 klhdc1 coding upstream 60649 58300100 ~ 58308174 (+)
LOC110498189 klhdc1 coding upstream 70564 58293310 ~ 58298259 (+)
wdr20a LOC106611292 coding upstream 109431 58251569 ~ 58259392 (+)
LOC118941556 NA coding upstream 122288 58246466 ~ 58246535 (+)
LOC118941559 NA coding upstream 125426 58243326 ~ 58243397 (+)
LOC110498192 LOC106610665 coding downstream 13491 58382544 ~ 58566706 (+)
mis18bp1 mis18bp1 coding downstream 237555 58606103 ~ 58625926 (+)
degs2 degs2 coding downstream 269992 58639045 ~ 58648752 (+)
disp2 disp2 coding downstream 486678 58855731 ~ 58868973 (+)
LOC110498202 LOC106608562 coding downstream 514753 58883806 ~ 58892741 (+)
G1643063 lrr1 non-coding upstream 54400 58313760 ~ 58314423 (+)
G1643062 NA non-coding upstream 55859 58312724 ~ 58312964 (+)
G1643056 lrr1 non-coding upstream 57781 58310321 ~ 58311042 (+)
G1643053 lrr1 non-coding upstream 58639 58308700 ~ 58310184 (+)
G1643434 NA non-coding downstream 63088 58432141 ~ 58433073 (+)
G1643398 NA non-coding downstream 170025 58539078 ~ 58575308 (+)
G1643511 NA non-coding downstream 208515 58577568 ~ 58577814 (+)
G1643516 NA non-coding downstream 230529 58599582 ~ 58605523 (+)
G1642993 LOC106611338 other upstream 192338 58164477 ~ 58176485 (+)
G1642565 NA other upstream 686270 57656349 ~ 57682553 (+)
G1642062 NA other upstream 1092046 57275053 ~ 57276777 (+)
G1641935 NA other upstream 1224898 57135826 ~ 57143925 (+)
G1644123 NA other downstream 685470 59054523 ~ 59057223 (+)
G1644280 NA other downstream 827631 59196684 ~ 59197013 (+)
G1644569 NA other downstream 1239547 59608600 ~ 59609394 (+)
G1644651 NA other downstream 1378931 59747984 ~ 59748345 (+)
LOC110498402 LOC106604468 other downstream 2014468 60382983 ~ 60392450 (+)

Expression


Co-expression Network