Gene
RNA
| Item | Value |
|---|---|
| gene id | G1643434 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 58432141 ~ 58433073 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1880029 | True | 222 | lncRNA | 0.40 | 2 | 58432141 | 58433073 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dnaaf2 | klhdc1 | coding | upstream | 123967 | 58300100 ~ 58308174 (+) |
| LOC110498189 | klhdc1 | coding | upstream | 133882 | 58293310 ~ 58298259 (+) |
| wdr20a | LOC106611292 | coding | upstream | 172749 | 58251569 ~ 58259392 (+) |
| LOC118941556 | NA | coding | upstream | 185606 | 58246466 ~ 58246535 (+) |
| LOC118941559 | NA | coding | upstream | 188744 | 58243326 ~ 58243397 (+) |
| mis18bp1 | mis18bp1 | coding | downstream | 173535 | 58606103 ~ 58625926 (+) |
| degs2 | degs2 | coding | downstream | 205972 | 58639045 ~ 58648752 (+) |
| disp2 | disp2 | coding | downstream | 422658 | 58855731 ~ 58868973 (+) |
| LOC110498202 | LOC106608562 | coding | downstream | 450733 | 58883806 ~ 58892741 (+) |
| prlh2r | LOC106608506 | coding | downstream | 462179 | 58895252 ~ 58904165 (+) |
| G1643374 | NA | non-coding | upstream | 63088 | 58368823 ~ 58369053 (+) |
| G1643063 | lrr1 | non-coding | upstream | 117718 | 58313760 ~ 58314423 (+) |
| G1643062 | NA | non-coding | upstream | 119177 | 58312724 ~ 58312964 (+) |
| G1643056 | lrr1 | non-coding | upstream | 121099 | 58310321 ~ 58311042 (+) |
| G1643053 | lrr1 | non-coding | upstream | 121957 | 58308700 ~ 58310184 (+) |
| G1643398 | NA | non-coding | downstream | 106005 | 58539078 ~ 58575308 (+) |
| G1643511 | NA | non-coding | downstream | 144495 | 58577568 ~ 58577814 (+) |
| G1643516 | NA | non-coding | downstream | 166509 | 58599582 ~ 58605523 (+) |
| G1643530 | NA | non-coding | downstream | 179705 | 58612778 ~ 58612996 (+) |
| G1642993 | LOC106611338 | other | upstream | 255656 | 58164477 ~ 58176485 (+) |
| G1642565 | NA | other | upstream | 749588 | 57656349 ~ 57682553 (+) |
| G1642062 | NA | other | upstream | 1155364 | 57275053 ~ 57276777 (+) |
| G1641935 | NA | other | upstream | 1288216 | 57135826 ~ 57143925 (+) |
| G1644123 | NA | other | downstream | 621450 | 59054523 ~ 59057223 (+) |
| G1644280 | NA | other | downstream | 763611 | 59196684 ~ 59197013 (+) |
| G1644569 | NA | other | downstream | 1175527 | 59608600 ~ 59609394 (+) |
| G1644651 | NA | other | downstream | 1314911 | 59747984 ~ 59748345 (+) |
| LOC110498402 | LOC106604468 | other | downstream | 1950448 | 60382983 ~ 60392450 (+) |
