G1643530


Basic Information

Item Value
gene id G1643530
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 58612778 ~ 58612996 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1880128
ttggctgatttcttttgattttcccatgatgtcatgcaaagaggcactgagtttgaagctaggccttgaaatacacctcaaattgactcaaatgatgtcaattagcctatcagaagcttttaaagcaaTTACATAGTTTTCTGGAGTTTTACAAGCtgtgtaaaggcacagtcaacttagtgtgtgtaaacttcacacccactggaattgtgatacagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1880128 True 219 lncRNA 0.38 1 58612778 58612996

Neighbor

gene id symbol gene type direction distance location
LOC110498192 LOC106610665 coding upstream 46072 58382544 ~ 58566706 (+)
dnaaf2 klhdc1 coding upstream 304604 58300100 ~ 58308174 (+)
LOC110498189 klhdc1 coding upstream 314519 58293310 ~ 58298259 (+)
wdr20a LOC106611292 coding upstream 353386 58251569 ~ 58259392 (+)
LOC118941556 NA coding upstream 366243 58246466 ~ 58246535 (+)
degs2 degs2 coding downstream 26049 58639045 ~ 58648752 (+)
disp2 disp2 coding downstream 242735 58855731 ~ 58868973 (+)
LOC110498202 LOC106608562 coding downstream 270810 58883806 ~ 58892741 (+)
prlh2r LOC106608506 coding downstream 282256 58895252 ~ 58904165 (+)
LOC110498208 LOC106608166 coding downstream 402467 59015463 ~ 59022319 (+)
mis18bp1 mis18bp1 non-coding upstream 6149 58606103 ~ 58625926 (+)
G1643516 NA non-coding upstream 7255 58599582 ~ 58605523 (+)
G1643511 NA non-coding upstream 34964 58577568 ~ 58577814 (+)
G1643398 NA non-coding upstream 37470 58539078 ~ 58575308 (+)
G1643434 NA non-coding upstream 179705 58432141 ~ 58433073 (+)
G1643532 NA non-coding downstream 4123 58617119 ~ 58617324 (+)
G1643586 LOC106608927 non-coding downstream 105655 58718651 ~ 58722660 (+)
G1643591 NA non-coding downstream 123498 58736494 ~ 58739850 (+)
G1643594 NA non-coding downstream 128512 58741508 ~ 58741882 (+)
G1643645 NA non-coding downstream 220800 58833796 ~ 58834011 (+)
G1642993 LOC106611338 other upstream 436293 58164477 ~ 58176485 (+)
G1642565 NA other upstream 930225 57656349 ~ 57682553 (+)
G1642062 NA other upstream 1336001 57275053 ~ 57276777 (+)
G1641935 NA other upstream 1468853 57135826 ~ 57143925 (+)
G1644123 NA other downstream 441527 59054523 ~ 59057223 (+)
G1644280 NA other downstream 583688 59196684 ~ 59197013 (+)
G1644569 NA other downstream 995604 59608600 ~ 59609394 (+)
G1644651 NA other downstream 1134988 59747984 ~ 59748345 (+)
LOC110498402 LOC106604468 other downstream 1770525 60382983 ~ 60392450 (+)

Expression


Co-expression Network