G1644921


Basic Information

Item Value
gene id G1644921
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 59813622 ~ 59813834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1881718
TCTATAAAGAGGCCTTACAGGAGGTATGCGAAGGTCTATAAAGAGGCCTTACAGGAGGCATGTGAAGGTCTATAAAGAGGCCTTACAGGAGGCATGTGAAGGTCTATAAAGTGGCCTTACAGGAGTTATTTGAAGGTCTATAAAGAGGCCTTACAGGAGGCATGTGAAGGTCTATTAAGAGGCCTTACAAGAGTCTTGTGAAGGTCTATTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1881718 True 213 lncRNA 0.44 1 59813622 59813834

Neighbor

gene id symbol gene type direction distance location
LOC110498234 LOC106607246 coding upstream 14035 59773968 ~ 59799587 (+)
LOC110498214 LOC106607310 coding upstream 52907 59739558 ~ 59760715 (+)
rdh14a LOC106607934 coding upstream 325228 59482942 ~ 59488394 (+)
LOC110498210 osr1 coding upstream 586104 59220036 ~ 59227518 (+)
LOC110498208 LOC106608166 coding upstream 791303 59015463 ~ 59022319 (+)
ankef1b LOC106609265 coding downstream 767 59814601 ~ 59839856 (+)
LOC110510484 LOC106607199 coding downstream 51758 59865592 ~ 59961717 (+)
LOC110498222 LOC106603387 coding downstream 182691 59996525 ~ 60022616 (+)
LOC110498212 rp1l1 coding downstream 497625 60311459 ~ 60330337 (+)
fndc4b LOC106604723 coding downstream 544214 60358048 ~ 60375297 (+)
G1644645 NA non-coding upstream 50979 59761309 ~ 59762643 (+)
G1644654 NA non-coding upstream 61764 59751626 ~ 59751858 (+)
G1644653 NA non-coding upstream 62479 59750937 ~ 59751143 (+)
G1644643 NA non-coding upstream 82383 59730256 ~ 59731239 (+)
G1644641 NA non-coding upstream 84360 59727628 ~ 59729262 (+)
G1644944 NA non-coding downstream 31527 59845361 ~ 59845842 (+)
G1644954 NA non-coding downstream 36524 59850358 ~ 59850594 (+)
G1644958 NA non-coding downstream 39794 59853628 ~ 59853860 (+)
G1644960 NA non-coding downstream 41368 59855202 ~ 59855654 (+)
G1644961 NA non-coding downstream 43496 59857330 ~ 59857650 (+)
G1644651 NA other upstream 65277 59747984 ~ 59748345 (+)
G1644569 NA other upstream 204228 59608600 ~ 59609394 (+)
G1644280 NA other upstream 616609 59196684 ~ 59197013 (+)
G1644123 NA other upstream 756399 59054523 ~ 59057223 (+)
LOC110498189 klhdc1 other upstream 1515387 58293310 ~ 58298259 (+)
LOC110498402 LOC106604468 other downstream 569687 60382983 ~ 60392450 (+)
plaat1l LOC106611413 other downstream 585073 60398860 ~ 60402461 (+)
chrna2a LOC103467111 other downstream 659289 60462967 ~ 60475546 (+)
LOC110498236 LOC106603790 other downstream 728202 60541955 ~ 60546243 (+)
G1645443 NA other downstream 902099 60715933 ~ 60718611 (+)

Expression


Co-expression Network