G1645034


Basic Information

Item Value
gene id G1645034
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 60001944 ~ 60003668 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1881849
agagcagggtttatcatgggaataggatgattacccaggtaacagcagggtttatcatggggATAGGATGATTACCCAGGTAAcagcagggtttatcatggggATAGGATGATTACCCAGGTAACAGCAGGGTTTATCACGGGGATAGGATGATTACCCAAgtaacagagcagggtttatcatggggATAGGATgattacccaggtaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1881849 True 209 lncRNA 0.46 2 60001944 60003668

Neighbor

gene id symbol gene type direction distance location
LOC110510484 LOC106607199 coding upstream 40227 59865592 ~ 59961717 (+)
ankef1b LOC106609265 coding upstream 162088 59814601 ~ 59839856 (+)
LOC110498234 LOC106607246 coding upstream 202357 59773968 ~ 59799587 (+)
LOC110498214 LOC106607310 coding upstream 241229 59739558 ~ 59760715 (+)
rdh14a LOC106607934 coding upstream 513550 59482942 ~ 59488394 (+)
LOC110498212 rp1l1 coding downstream 307791 60311459 ~ 60330337 (+)
fndc4b LOC106604723 coding downstream 354380 60358048 ~ 60375297 (+)
LOC110498402 LOC106604468 coding downstream 379315 60382983 ~ 60392450 (+)
plaat1l LOC106611413 coding downstream 395192 60398860 ~ 60402461 (+)
LOC118941500 NA coding downstream 398791 60402459 ~ 60405097 (+)
G1645016 NA non-coding upstream 42137 59958283 ~ 59959807 (+)
G1645013 NA non-coding upstream 46019 59955611 ~ 59955925 (+)
G1644968 NA non-coding upstream 137438 59864215 ~ 59864506 (+)
G1644961 NA non-coding upstream 144294 59857330 ~ 59857650 (+)
G1644960 NA non-coding upstream 146290 59855202 ~ 59855654 (+)
LOC110498222 LOC106603387 non-coding downstream 17257 59996525 ~ 60022616 (+)
G1645042 NA non-coding downstream 20264 60023932 ~ 60024286 (+)
G1645044 NA non-coding downstream 22215 60025883 ~ 60026242 (+)
G1645045 NA non-coding downstream 22669 60026337 ~ 60026829 (+)
G1645046 NA non-coding downstream 23221 60026889 ~ 60027106 (+)
G1644651 NA other upstream 253599 59747984 ~ 59748345 (+)
G1644569 NA other upstream 392550 59608600 ~ 59609394 (+)
G1644280 NA other upstream 804931 59196684 ~ 59197013 (+)
G1644123 NA other upstream 944721 59054523 ~ 59057223 (+)
LOC110498189 klhdc1 other upstream 1703709 58293310 ~ 58298259 (+)
chrna2a LOC103467111 other downstream 469455 60462967 ~ 60475546 (+)
LOC110498236 LOC106603790 other downstream 538368 60541955 ~ 60546243 (+)
G1645443 NA other downstream 712265 60715933 ~ 60718611 (+)

Expression


Co-expression Network