G1645046


Basic Information

Item Value
gene id G1645046
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 60026889 ~ 60027106 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1881862
attcaacagaaatgtgtcttccgcattcaacccaacccttctgaatcagagaggtgcagtggGGTCTGctataatcgacatccacgtcttcggcgcccggggaacagtgttgctcaggggcagaacgacagatttgtaccttgtcagctcggggattcgatccagcccAACGATCTAACCCCTGGGCTACCTTGTCGGCGAATGTTCCCCTAGGAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1881862 True 218 lncRNA 0.55 1 60026889 60027106

Neighbor

gene id symbol gene type direction distance location
LOC110498222 LOC106603387 coding upstream 4273 59996525 ~ 60022616 (+)
LOC110510484 LOC106607199 coding upstream 65172 59865592 ~ 59961717 (+)
ankef1b LOC106609265 coding upstream 187033 59814601 ~ 59839856 (+)
LOC110498234 LOC106607246 coding upstream 227302 59773968 ~ 59799587 (+)
LOC110498214 LOC106607310 coding upstream 266174 59739558 ~ 59760715 (+)
LOC110498212 rp1l1 coding downstream 284353 60311459 ~ 60330337 (+)
fndc4b LOC106604723 coding downstream 330942 60358048 ~ 60375297 (+)
LOC110498402 LOC106604468 coding downstream 355877 60382983 ~ 60392450 (+)
plaat1l LOC106611413 coding downstream 371754 60398860 ~ 60402461 (+)
LOC118941500 NA coding downstream 375353 60402459 ~ 60405097 (+)
G1645045 NA non-coding upstream 60 60026337 ~ 60026829 (+)
G1645044 NA non-coding upstream 647 60025883 ~ 60026242 (+)
G1645042 NA non-coding upstream 2603 60023932 ~ 60024286 (+)
G1645034 NA non-coding upstream 23221 60001944 ~ 60003668 (+)
G1645050 NA non-coding downstream 2662 60029768 ~ 60030006 (+)
G1645066 NA non-coding downstream 33362 60060468 ~ 60061064 (+)
G1645171 LOC106606422 non-coding downstream 48361 60075467 ~ 60086020 (+)
G1645172 NA non-coding downstream 51059 60078165 ~ 60082808 (+)
G1645180 NA non-coding downstream 87682 60114788 ~ 60123112 (+)
G1644651 NA other upstream 278544 59747984 ~ 59748345 (+)
G1644569 NA other upstream 417495 59608600 ~ 59609394 (+)
G1644280 NA other upstream 829876 59196684 ~ 59197013 (+)
G1644123 NA other upstream 969666 59054523 ~ 59057223 (+)
LOC110498189 klhdc1 other upstream 1728654 58293310 ~ 58298259 (+)
chrna2a LOC103467111 other downstream 446017 60462967 ~ 60475546 (+)
LOC110498236 LOC106603790 other downstream 514930 60541955 ~ 60546243 (+)
G1645443 NA other downstream 688827 60715933 ~ 60718611 (+)

Expression


Co-expression Network