G1645409


Basic Information

Item Value
gene id G1645409
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 60650557 ~ 60705313 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1882351
atttgtttccttattaatgagtttgagccaatcagatgtgttgtgacaaggtaggggggggttgggggccgtacagaagacagccctatttggtaaaataccaagtccatattatggcaagaacagctcaaataagcaaagagaaataacagtccatcatttctttaagacatgaaggtcagtcaatacggaaaatgtcaagaacttttaaagtttcttcaagtgcagtcacaaaaaccatcaagcgctgtgatgaaactggttctcatgaggaccgccacaggattggaagacccagagttacctctactgcagaggataagttcattag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1882351 True 331 lncRNA 0.41 2 60650557 60705313

Neighbor

gene id symbol gene type direction distance location
LOC110498226 LOC106603826 coding upstream 80818 60556736 ~ 60569739 (+)
LOC110498236 LOC106603790 coding upstream 105616 60541955 ~ 60546243 (+)
chrna2a LOC103467111 coding upstream 175011 60462967 ~ 60475546 (+)
LOC118941500 NA coding upstream 245460 60402459 ~ 60405097 (+)
plaat1l LOC106611413 coding upstream 248096 60398860 ~ 60402461 (+)
LOC100136771 pomc coding downstream 74628 60779941 ~ 60782510 (+)
LOC110498232 LOC106605409 coding downstream 144530 60849843 ~ 60866965 (+)
xdh xdh coding downstream 183051 60888364 ~ 60937197 (+)
LOC110498404 LOC105025554 coding downstream 537109 61242422 ~ 61308910 (+)
LOC118941508 LOC106603467 coding downstream 657119 61362432 ~ 61382346 (+)
G1645318 NA non-coding upstream 100436 60549195 ~ 60550121 (+)
G1645380 NA non-coding upstream 110042 60540281 ~ 60540515 (+)
G1645379 NA non-coding upstream 110334 60540012 ~ 60540223 (+)
G1645316 LOC106603693 non-coding upstream 116228 60477968 ~ 60534329 (+)
G1645464 NA non-coding downstream 54057 60759370 ~ 60759890 (+)
G1645480 NA non-coding downstream 78501 60783814 ~ 60788604 (+)
G1645498 NA non-coding downstream 111528 60816841 ~ 60818727 (+)
G1645499 NA non-coding downstream 114662 60819975 ~ 60820727 (+)
G1645506 NA non-coding downstream 132142 60837455 ~ 60839745 (+)
LOC110498402 LOC106604468 other upstream 258894 60382983 ~ 60392450 (+)
G1644651 NA other upstream 902212 59747984 ~ 59748345 (+)
G1645443 NA other downstream 10620 60715933 ~ 60718611 (+)
G1645444 NA other downstream 13445 60718758 ~ 60738957 (+)
G1646089 NA other downstream 497045 61200860 ~ 61203352 (+)
G1646225 NA other downstream 639474 61344787 ~ 61345154 (+)

Expression


Co-expression Network