G1645464


Basic Information

Item Value
gene id G1645464
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 60759370 ~ 60759890 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1882435
tatactgtattctagtcatggttcatcctatataactactgttgtccacttcatatgtatatactgtattctagttcatcctatataactactgttgtccacttcatatgtatatactgtattctagttcatcctatataactactgttgtccacttcatatgtatatactgtattctagtcatggttcatcctatataactactgctgtccacttcatatgtatatactgtcttctagtcatggttcatcctatataactactgttgtccacttcatatgtatatactgtcttctagtcatggttcatcctatataactactgttgtccacttcatatgtacatactgtcttctagtcatggctcatcctatacaACTACTGCTGTACAAACCTTTTCTATtcctatactgtccatactgtctatacacaccattatgtGTACCactggaggctgttgaggggaggacggctcttaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1882435 True 479 lncRNA 0.35 2 60759370 60759890

Neighbor

gene id symbol gene type direction distance location
LOC110498226 LOC106603826 coding upstream 189631 60556736 ~ 60569739 (+)
LOC110498236 LOC106603790 coding upstream 214429 60541955 ~ 60546243 (+)
chrna2a LOC103467111 coding upstream 283824 60462967 ~ 60475546 (+)
LOC118941500 NA coding upstream 354273 60402459 ~ 60405097 (+)
plaat1l LOC106611413 coding upstream 356909 60398860 ~ 60402461 (+)
LOC100136771 pomc coding downstream 20051 60779941 ~ 60782510 (+)
LOC110498232 LOC106605409 coding downstream 89953 60849843 ~ 60866965 (+)
xdh xdh coding downstream 128474 60888364 ~ 60937197 (+)
LOC110498404 LOC105025554 coding downstream 482532 61242422 ~ 61308910 (+)
LOC118941508 LOC106603467 coding downstream 602542 61362432 ~ 61382346 (+)
G1645415 NA non-coding upstream 44265 60657724 ~ 60715105 (+)
G1645409 NA non-coding upstream 54057 60650557 ~ 60705313 (+)
G1645318 NA non-coding upstream 209249 60549195 ~ 60550121 (+)
G1645380 NA non-coding upstream 218855 60540281 ~ 60540515 (+)
G1645379 NA non-coding upstream 219147 60540012 ~ 60540223 (+)
G1645480 NA non-coding downstream 23924 60783814 ~ 60788604 (+)
G1645498 NA non-coding downstream 56951 60816841 ~ 60818727 (+)
G1645499 NA non-coding downstream 60085 60819975 ~ 60820727 (+)
G1645506 NA non-coding downstream 77565 60837455 ~ 60839745 (+)
G1645507 NA non-coding downstream 80294 60840184 ~ 60840557 (+)
G1645444 NA other upstream 20413 60718758 ~ 60738957 (+)
G1645443 NA other upstream 40759 60715933 ~ 60718611 (+)
G1646089 NA other downstream 442468 61200860 ~ 61203352 (+)
G1646225 NA other downstream 584897 61344787 ~ 61345154 (+)
G1646294 NA other downstream 798151 61558041 ~ 61561084 (+)
G1646509 NA other downstream 1384293 62144183 ~ 62145290 (+)

Expression


Co-expression Network