G1645508


Basic Information

Item Value
gene id G1645508
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 60840721 ~ 60841051 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1882486
CAACCTAACAGTCTACATACAGCAACAACTAGACAACCTAACAGTCTACATACAGCAACAACCTAACAGTCTACATACAGCAACAACTAGACAACCTAACTGTCCACATACAGCAACAACCTAACAGTCTACATACAGCAACAACCTAACAGTCTACATACAGCAACAACTAGACAACCTAACAGTCCACATACAGCAACAACCTAACAGTCTACATACAGCAACAACTAGACAACCTAACAGTCTACATACAGCAACAACCTAACAGTCTACATACAGCAACAACCTAACAGTCTACATACAGCAACAACTAGACAACCTAACAGTCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1882486 True 331 lncRNA 0.40 1 60840721 60841051

Neighbor

gene id symbol gene type direction distance location
LOC100136771 pomc coding upstream 58211 60779941 ~ 60782510 (+)
LOC110498226 LOC106603826 coding upstream 270982 60556736 ~ 60569739 (+)
LOC110498236 LOC106603790 coding upstream 295780 60541955 ~ 60546243 (+)
chrna2a LOC103467111 coding upstream 365175 60462967 ~ 60475546 (+)
LOC118941500 NA coding upstream 435624 60402459 ~ 60405097 (+)
LOC110498232 LOC106605409 coding downstream 8792 60849843 ~ 60866965 (+)
xdh xdh coding downstream 47313 60888364 ~ 60937197 (+)
LOC110498404 LOC105025554 coding downstream 401371 61242422 ~ 61308910 (+)
LOC118941508 LOC106603467 coding downstream 521381 61362432 ~ 61382346 (+)
LOC118941509 LOC106603467 coding downstream 551521 61392572 ~ 61401264 (+)
G1645507 NA non-coding upstream 164 60840184 ~ 60840557 (+)
G1645506 NA non-coding upstream 976 60837455 ~ 60839745 (+)
G1645499 NA non-coding upstream 19994 60819975 ~ 60820727 (+)
G1645498 NA non-coding upstream 21994 60816841 ~ 60818727 (+)
G1645480 NA non-coding upstream 52117 60783814 ~ 60788604 (+)
G1645509 NA non-coding downstream 993 60842044 ~ 60842341 (+)
G1645477 NA non-coding downstream 31183 60872234 ~ 60873045 (+)
G1645479 NA non-coding downstream 37852 60878903 ~ 60887812 (+)
G1645533 NA non-coding downstream 78178 60919229 ~ 60922862 (+)
G1645557 NA non-coding downstream 204245 61045296 ~ 61046565 (+)
G1645444 NA other upstream 101764 60718758 ~ 60738957 (+)
G1645443 NA other upstream 122110 60715933 ~ 60718611 (+)
plaat1l LOC106611413 other upstream 438317 60398860 ~ 60402461 (+)
G1646089 NA other downstream 361307 61200860 ~ 61203352 (+)
G1646225 NA other downstream 503736 61344787 ~ 61345154 (+)
G1646294 NA other downstream 716990 61558041 ~ 61561084 (+)
G1646509 NA other downstream 1303132 62144183 ~ 62145290 (+)

Expression


Co-expression Network