G1645557


Basic Information

Item Value
gene id G1645557
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 61045296 ~ 61046565 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1882541
taaccagacagtactctaggtgttataggaccagggattgaccatataactggacagtactctaggtgttataggaccagagattgaccatataaccagacagtactctaggtgttataggaccagggattgaccatataactggacagtactctaagtgtgataggaccagggattgaccatataactggacagtactctaagtgtgataggaccagggattgaccatataactggacagtactctaagtgtgataggaccagggattgaccatataactggacagtactctaagtgtgataggaccagggattgaccatataactggacagtactctaggtgttatag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1882541 True 350 lncRNA 0.43 2 61045296 61046565

Neighbor

gene id symbol gene type direction distance location
xdh xdh coding upstream 108099 60888364 ~ 60937197 (+)
LOC110498232 LOC106605409 coding upstream 178331 60849843 ~ 60866965 (+)
LOC100136771 pomc coding upstream 262786 60779941 ~ 60782510 (+)
LOC110498226 LOC106603826 coding upstream 475557 60556736 ~ 60569739 (+)
LOC110498236 LOC106603790 coding upstream 500355 60541955 ~ 60546243 (+)
LOC110498404 LOC105025554 coding downstream 195857 61242422 ~ 61308910 (+)
LOC118941508 LOC106603467 coding downstream 315867 61362432 ~ 61382346 (+)
LOC118941509 LOC106603467 coding downstream 346007 61392572 ~ 61401264 (+)
LOC118941510 LOC106603467 coding downstream 361076 61407641 ~ 61430060 (+)
LOC110498259 LOC106603387 coding downstream 654140 61700705 ~ 61707803 (+)
G1645533 NA non-coding upstream 122434 60919229 ~ 60922862 (+)
G1645479 NA non-coding upstream 157484 60878903 ~ 60887812 (+)
G1645477 NA non-coding upstream 172251 60872234 ~ 60873045 (+)
G1645509 NA non-coding upstream 202955 60842044 ~ 60842341 (+)
G1645508 NA non-coding upstream 204245 60840721 ~ 60841051 (+)
G1646028 NA non-coding downstream 59270 61105835 ~ 61106063 (+)
G1646047 NA non-coding downstream 73110 61119675 ~ 61119893 (+)
G1646084 NA non-coding downstream 142283 61188848 ~ 61189199 (+)
G1646089 NA non-coding downstream 154295 61200860 ~ 61203352 (+)
G1646090 NA non-coding downstream 155294 61201859 ~ 61205016 (+)
G1645444 NA other upstream 306339 60718758 ~ 60738957 (+)
G1645443 NA other upstream 326685 60715933 ~ 60718611 (+)
chrna2a LOC103467111 other upstream 569767 60462967 ~ 60475546 (+)
plaat1l LOC106611413 other upstream 642892 60398860 ~ 60402461 (+)
G1646225 NA other downstream 298222 61344787 ~ 61345154 (+)
G1646294 NA other downstream 511476 61558041 ~ 61561084 (+)
G1646509 NA other downstream 1097618 62144183 ~ 62145290 (+)

Expression


Co-expression Network