G1649865


Basic Information

Item Value
gene id G1649865
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 66269806 ~ 66271020 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1888489
ggttatgggtaacaatcctggttataggtaacaatcctggttagaggtaacaatcctggttatgggtaacaatcctggttataggtaacactcctggttagaggtaacaatccGGGTTatgggtaacaatcctggttagaggtaacaatcctggttagaggtaacaatcctggttatgggtaacaatcctggttataggtaacaatcctggttagaggtaacaatcctggttataggtaacaatcctggttagaggtaacaatcctggttagaggtaacaatcctggttataggtaacaatcctggttatagataacaatcctggttatagataacaatcctggttatagaaaacaatcctggttatagaaaacaatcctggttataggtaacaatcctggttaagGGTAACAATCCTAGTTATAGATagcaatcctggttataggtaacaatcctggttagaggtaacaatcctggttctAGATAACAATCCTGGatagaggtaacaatcctggttatgggtaacaatcctggttaaaGGTATCAATCCTGGatagaggtaacaatcctggttagaggtaacaatcc

Function

NR:

description
PREDICTED: proteoglycan 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1888489 True 588 lncRNA 0.39 2 66269806 66271020

Neighbor

gene id symbol gene type direction distance location
LOC110498653 atrn coding upstream 461431 65549526 ~ 65812816 (+)
LOC110498317 LOC106600683 coding upstream 742848 65515808 ~ 65526958 (+)
LOC110498315 LOC106606645 coding upstream 978715 65250079 ~ 65291091 (+)
LOC118941380 NA coding upstream 1025513 65241682 ~ 65244293 (+)
nat8 LOC106607815 coding upstream 1030369 65229684 ~ 65239437 (+)
LOC110498312 LOC106560777 coding downstream 74712 66345732 ~ 66347001 (+)
LOC110498313 LOC106611434 coding downstream 100006 66370807 ~ 66379174 (+)
cfd LOC101448046 coding downstream 447414 66718434 ~ 66723596 (+)
LOC110498318 LOC106560213 coding downstream 671693 66942713 ~ 66975247 (+)
LOC110498319 pgrmc2 coding downstream 715811 66986831 ~ 66995509 (+)
G1649786 NA non-coding upstream 117525 66150289 ~ 66152281 (+)
G1649659 NA non-coding upstream 180867 66088513 ~ 66088939 (+)
G1649647 NA non-coding upstream 184734 66060417 ~ 66085072 (+)
G1649643 NA non-coding upstream 185966 66051864 ~ 66083840 (+)
G1649648 NA non-coding upstream 199284 66060579 ~ 66070522 (+)
G1649873 NA non-coding downstream 15644 66286664 ~ 66287347 (+)
G1649874 NA non-coding downstream 18348 66289368 ~ 66290741 (+)
G1649888 NA non-coding downstream 59748 66330768 ~ 66331499 (+)
G1649895 NA non-coding downstream 71470 66342490 ~ 66342726 (+)
G1649897 NA non-coding downstream 77042 66348062 ~ 66348269 (+)
G1649614 NA other upstream 293566 65970505 ~ 65976240 (+)
G1649319 NA other upstream 667390 65600960 ~ 65602416 (+)
G1649309 NA other upstream 687224 65578439 ~ 65582582 (+)
G1649291 NA other upstream 724751 65544377 ~ 65545055 (+)

Expression


Co-expression Network