G1650162


Basic Information

Item Value
gene id G1650162
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 66573816 ~ 66574637 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1888836
gtgttacttccctcccagggctgtgttacttccctcccagggctgtgttacttccttcccagggctgtgttacttccgtcccagggctgtgttacttccTTCCCAGGGCTGTGTTACTTCCTTCCCAAGGCTGTGTTACTTccttcccagggctgtgttacttccttcccagggctgtgttacttccTTCCCAAGGCTGTGTTACTTCCTTCCCAAGGCTGTGTTACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1888836 True 228 lncRNA 0.54 2 66573816 66574637

Neighbor

gene id symbol gene type direction distance location
LOC110498313 LOC106611434 coding upstream 194642 66370807 ~ 66379174 (+)
LOC110498312 LOC106560777 coding upstream 226815 66345732 ~ 66347001 (+)
LOC110498653 atrn coding upstream 765441 65549526 ~ 65812816 (+)
LOC110498317 LOC106600683 coding upstream 1046858 65515808 ~ 65526958 (+)
LOC110498315 LOC106606645 coding upstream 1282725 65250079 ~ 65291091 (+)
cfd LOC101448046 coding downstream 143797 66718434 ~ 66723596 (+)
LOC110498318 LOC106560213 coding downstream 368076 66942713 ~ 66975247 (+)
LOC110498319 pgrmc2 coding downstream 412194 66986831 ~ 66995509 (+)
jade1 jade1 coding downstream 426698 67001335 ~ 67087574 (+)
G1650149 NA non-coding upstream 18548 66554975 ~ 66555268 (+)
G1650137 NA non-coding upstream 37521 66536055 ~ 66536295 (+)
G1650130 NA non-coding upstream 43026 66530535 ~ 66530790 (+)
G1650129 NA non-coding upstream 43304 66530207 ~ 66530512 (+)
G1650121 NA non-coding upstream 49380 66524154 ~ 66524436 (+)
G1650165 NA non-coding downstream 613 66575250 ~ 66576470 (+)
G1650181 NA non-coding downstream 26339 66600976 ~ 66601329 (+)
G1650183 NA non-coding downstream 28121 66602758 ~ 66607118 (+)
G1650184 NA non-coding downstream 30703 66605340 ~ 66606591 (+)
G1650191 NA non-coding downstream 47306 66621943 ~ 66676734 (+)
G1649614 NA other upstream 597576 65970505 ~ 65976240 (+)
G1649319 NA other upstream 971400 65600960 ~ 65602416 (+)
G1649309 NA other upstream 991234 65578439 ~ 65582582 (+)
G1649291 NA other upstream 1028761 65544377 ~ 65545055 (+)

Expression


Co-expression Network