G1650241


Basic Information

Item Value
gene id G1650241
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 66745789 ~ 66746880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1888940
cctccatcagtctcctcctctcctttattctagtcTCCATCATCAGTCTCCTACCCTCCTTTATtctagtctcctcctctcctctcttgtagtctcctccatcagtctcctcttctcctctcttctagtctccttcatcagtctcctcctcttctttattctagtctcctccatcagtctcctcctctcctttattctagtcTCCTACATCAGACTCCTCCACTCCTTTATTCTAGTCTCCTACATCACTCTTCCCCTCCTttattctagtctcctccatcagtctcctcctcttctctattcGAGTCTCCTCCATcaggctcctcctctcctgtcttctagtCACCTtcatcagtctcctcctctcctttattctagtcTCCTTCGTCAGTCTTCTACCCTCCtttattctcctcctctcctctcttgtagtctcctccatcagtctcctcttctcctctcttctagtctcctTCATCAGACTCTTCTCCTTTATTCTAGTCTCCTtcatcagtctcctcctcttctttattctagtctcctccatcagtctcctccccttcttcattctagtctcctccatcaggctcctcctctcctttattctagtctcctacatcggtctcctcctctcctttattctagtctcctccatcagtaTCCTCCACTCCTTTATTCTAGTCTCCTACATCACTCTTCCCCTCCTttattctagtctcctccatcagtctcctcctctcctctcttctagtctcctccaccaggctcctcctctcctgtcttctagtCACCTTCATcaggctcctcctctcctgtcttctagtctcctccatcagtctcctcctctcctttattctagtctcctccaccaggctcctcctctcctgtcttctagtCACCTTCATcaggctcctcctctcctgtcttctattttcctccatcagtctcctccactcttctagtctcctccatcagtctcatcCTCATCCCTTCATCAGACTCTTCTCCTTTATTCTAGTCTCCTtaatcactctcctcctcttctttattctagtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1888940 True 1056 lncRNA 0.48 2 66745789 66746880

Neighbor

gene id symbol gene type direction distance location
cfd LOC101448046 coding upstream 22193 66718434 ~ 66723596 (+)
LOC110498313 LOC106611434 coding upstream 366615 66370807 ~ 66379174 (+)
LOC110498312 LOC106560777 coding upstream 398788 66345732 ~ 66347001 (+)
LOC110498653 atrn coding upstream 937414 65549526 ~ 65812816 (+)
LOC110498317 LOC106600683 coding upstream 1218831 65515808 ~ 65526958 (+)
LOC110498318 LOC106560213 coding downstream 195833 66942713 ~ 66975247 (+)
LOC110498319 pgrmc2 coding downstream 239951 66986831 ~ 66995509 (+)
jade1 jade1 coding downstream 254455 67001335 ~ 67087574 (+)
G1650236 NA non-coding upstream 3850 66736445 ~ 66741939 (+)
G1650205 NA non-coding upstream 55318 66676088 ~ 66690471 (+)
G1650191 NA non-coding upstream 69055 66621943 ~ 66676734 (+)
G1650203 NA non-coding upstream 73689 66666493 ~ 66672100 (+)
G1650183 NA non-coding upstream 138671 66602758 ~ 66607118 (+)
G1650249 NA non-coding downstream 11815 66758695 ~ 66763420 (+)
G1650373 NA non-coding downstream 50345 66797225 ~ 66797824 (+)
G1650395 NA non-coding downstream 69832 66816712 ~ 66817038 (+)
G1650397 NA non-coding downstream 71829 66818709 ~ 66818918 (+)
G1650401 NA non-coding downstream 73661 66820541 ~ 66871438 (+)
G1649614 NA other upstream 769549 65970505 ~ 65976240 (+)
G1649319 NA other upstream 1143373 65600960 ~ 65602416 (+)
G1649309 NA other upstream 1163207 65578439 ~ 65582582 (+)
G1649291 NA other upstream 1200734 65544377 ~ 65545055 (+)

Expression


Co-expression Network