G1650470


Basic Information

Item Value
gene id G1650470
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 66912635 ~ 66913506 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1889233
TCATTATTATGCTGCAGTTACACATGGTCATGATGTCATATTGAAACCTGAGAGCTGATGATACAATCTGATATATTTACTGTTCCATGATGTTTTCCTCAAGAAAACCCCCAATGATTTACTGATGCTATTCTTGATTACGTTTGATATGATTCACCatgacaacccactgggcacagtcatcagttcaacatctagttgaTATTTACATTTTGATGGAGTTGTATttaaccatgtcattggatttagttGAAAAGGTAGGTGAAGGAAATGATACAATTCCAGGAATTCCTTTACATTGTGGCATGTTTTAAAGGAGAACATCAATCTGTGCTGGTACATTGAtgcctttttgcaaatccaatcagttttcaaAGTGAAAACAAAgttattcaaccagtttgtgcccagtgggatgtcacTGTACAATGAGGAGGTGAAATGACAAAAGTCATATTTATAAAGAGAACGTCAAGCTGTGCTGGTATATTTTTCACCATCTGATCTGACTCCATGACATGTCATTTACAGCCAGGTAGAGGTaagaacaaaaaaaacataattagGTAAAATAATAACCTATATGGGTCTAGAAGAAGAATCTGTACATCATTTAAATAGTTACAATCTAATATATATCATTTACAAAAAATACACAcgtatacacatatacacatacagtatatacactaccactcaaaagtttggacacacctactcattcaagggtttttcattattttcacTATTTCGTAGAATAATaattactacattgtagaataatagtgaagacatcaaaacttagatttttggttccaaactcTGTGTCTTtgagagacgcagagtaggtgaaaggatgatctccgcatgtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1889233 True 872 lncRNA 0.34 1 66912635 66913506

Neighbor

gene id symbol gene type direction distance location
cfd LOC101448046 coding upstream 189039 66718434 ~ 66723596 (+)
LOC110498313 LOC106611434 coding upstream 533461 66370807 ~ 66379174 (+)
LOC110498312 LOC106560777 coding upstream 565634 66345732 ~ 66347001 (+)
LOC110498653 atrn coding upstream 1104260 65549526 ~ 65812816 (+)
LOC110498317 LOC106600683 coding upstream 1385677 65515808 ~ 65526958 (+)
LOC110498318 LOC106560213 coding downstream 29207 66942713 ~ 66975247 (+)
LOC110498319 pgrmc2 coding downstream 73325 66986831 ~ 66995509 (+)
jade1 jade1 coding downstream 87829 67001335 ~ 67087574 (+)
G1650467 NA non-coding upstream 4058 66908242 ~ 66908577 (+)
G1650401 NA non-coding upstream 41197 66820541 ~ 66871438 (+)
G1650405 NA non-coding upstream 51275 66859368 ~ 66861360 (+)
G1650404 NA non-coding upstream 74716 66833911 ~ 66837919 (+)
G1650397 NA non-coding upstream 93717 66818709 ~ 66818918 (+)
G1650471 NA non-coding downstream 409 66913915 ~ 66914184 (+)
G1650472 NA non-coding downstream 1310 66914816 ~ 66915032 (+)
G1650473 NA non-coding downstream 1575 66915081 ~ 66915312 (+)
G1650475 NA non-coding downstream 6870 66920376 ~ 66920641 (+)
G1650494 yo84 non-coding downstream 36035 66949541 ~ 66967655 (+)
G1649614 NA other upstream 936395 65970505 ~ 65976240 (+)
G1649319 NA other upstream 1310219 65600960 ~ 65602416 (+)
G1649309 NA other upstream 1330053 65578439 ~ 65582582 (+)
G1649291 NA other upstream 1367580 65544377 ~ 65545055 (+)

Expression


Co-expression Network