XLOC_035951


Basic Information

Item Value
gene id XLOC_035951
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 45448870 ~ 45451410 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072270
CGCAACTGGAAAACACGCATAAAAACGtagagatttttaaaatattttgtgaccACCTCAAAACAAAGGGATATACTCGAACGCCGGATCAATGCCGCCTGAAGGTAAAGAAGCTCTGACAACAATACTTAAAAATCAGAGATTCCCTTAGAAAAACGGGAAGCTCAGGGGAAGAGAAGGAGAAGTTTGTGTGGTATGATTCAGTGGATAATATCCTTGTATGTCGGCCTACGAGTGACCCTCAATATATAATTGAATTTTCGCCAACTAACGTTACACAACAGTCCTTCCAGATGTCGTCAGATAAAGAAGACTTGTTATCAGAGACATCAACAACCGAAACTTCTCATGAGCCAGCTAACGTTACCAGTGATTGTACAGAATCGCAGAGTGTTCTATCAAGAACCTTTAGCAGGAAGAAAAAGACCAAAACTGTTGCAAGTGATATGATGGATCATATGTACACCTGCAGAAAAGGCAGTATGAGGATTTAATGCAGGCAGAGCAAGTTCGTCAGCAAGAGGAGAGAGAACGAATTGGATTATTGGATGAAAGCCCTGATGGATGCAGAGGAACGGCACTACCAAGCACAAAGAGAGGAACGCCaggaaacaaataaaatgtttatgacaGTGCTTAACAGAATGTTTGACATAATGGCATCTACATCACACCAACAGTCACCTCCACAATGCCAGCCATATTCTTCACATCAGGTTTACACAACTCAAGACATAACGTACACAAACCTGCAGCCTCGTGGTCAACAGTACATGTTCCCCACATCAGACGTGCCTTACCACACCAGAGACAGTTCATCTCCATCCTATCAATAGTGCTAGTTTTAGCAAAGGCTTAAAATGATATTCTGTTTTCTGGGTACTGTTAATGGTTGTTCTTTCTGGTTTGATGTTCACACTGTTTAAGGTGACTAAGCACAGCATGCAGTCCAGCACGTTTCATATTTTTATCAACTGTTATGTGTCTGCATATGTCAGAGCTCCAAGAGCGGGTATCACTGCTGCAGAGCAACAACTTCCAGAGCCATCCGACCTGCCAGTGATGTCTTACCTGTCAGAGCTGCCATGACATCTGACCTGCTAGTGACCCATGACCCAAGACCTCCAGAGTTCAGACAGATGCACCGACGGCCCAGACAGCAGTTGCACTGATGGCAATGGCTATTCATGGACTTCAAATGGTGGTAGCCATTCAGTAAACCCGGGTGCAACAACAGTTAGACAAGACACAATAGCAGGTCAATGTAAGAGTCATGTGATTCAGGTAATCAGTGAAAATGTCGTTCAGAGGTGAAAAATTAGGGGGAACTTGAAACGAGTTTGTGAATAAAGATTATGAAAAGGATACAGGGAGTGCTCTCCAGCAGCATTCGAGATCAGTTCTGCTGGTGATCACAACACATTTACTTTTCTTCCAATTTATCACAAGCTGTATCATTTCTTATAAAACAATTTACAATCAGAAGTTGGCAGAAGTTTTATTTTTGACtatctttttttaacagttttttttggtttatttttttaccttttcaATTTAATGTTGTTCAAGTAACATGAATTGGATGTATTATATCCaagttttaagatttattttaagtatattgTTTAAGTGACATAAATTTGATGTATTTATATCCAAGTTATTTCTAGTATCTTTAATCCAACTTACACCAGTATTTTCTACTGTTTATATctgactttaaaataaagtgttta

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072270 True 1739 lncRNA 0.40 2 45448870 45451410

Neighbor

gene id symbol gene type direction distance location
XLOC_035950 CU695141.2 coding upstream 3840 45444493 ~ 45445030 (+)
XLOC_035949 NA coding upstream 8299 45439621 ~ 45440571 (+)
XLOC_035948 NA coding upstream 11654 45433272 ~ 45437216 (+)
XLOC_035947 tti2 coding upstream 53555 45381298 ~ 45395315 (+)
XLOC_035946 chmp4bb coding upstream 73762 45361735 ~ 45375108 (+)
XLOC_035952 NA coding downstream 17584 45468994 ~ 45472217 (+)
XLOC_035953 NA coding downstream 149505 45600915 ~ 45604655 (+)
XLOC_035954 BX088696.2 coding downstream 157130 45608540 ~ 45610783 (+)
XLOC_035955 NA coding downstream 279782 45731192 ~ 45742905 (+)
XLOC_035956 CU137648.2 coding downstream 289634 45741044 ~ 45779978 (+)
XLOC_035943 NA non-coding upstream 224594 45223476 ~ 45224276 (+)
XLOC_035941 NA non-coding upstream 292703 45154888 ~ 45156167 (+)
XLOC_035957 CU137648.1 non-coding downstream 316243 45767653 ~ 45772619 (+)

Expression


Co-expression Network