XLOC_035949



Basic Information


Item Value
gene id XLOC_035949
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 45439621 ~ 45440571 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00072269
AAATACGTTCCTCCAATTCTGACCAAACTTGGCTGGTTATCGTAGTATgtgaaacactgagaaacggACTCAAAAATAGACATAGAGgAGAAAGGTTGTGTGGTCCCCAGTCAAAAGCTGGAAAGCGGAAACCCTGAAACATTTACATCATCTTCAGCCACCTCAAGAGTGCCTTCACCAGTTCCTGACTTCGCTTTACCACTTCCTGTCCCCCCGGCTTTACTTGAATATAACATTTCTCTAACACTACCTTCAGCTCCAACATGCGAGTCATCTCCATGTTCCGAGTCGTCAAGAAACATGTCAGTTATTTTTATCGTTTCATCCAGTCTCCATACGAAAAAGGAACACAGAGGATGTTCTCCTCAAGAGAAAGGTTGGACTAGGAAAGGGAGTTGGTCAAACAGCAGGACAATGAGAACAGCAGATTCGGTGCATGTATAGTAGATATGTTATCTCAAGTTTGGCCTGAAGAGAAACC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00072269 True 481 lncRNA 0.44 2 45439621 45440571

Neighbor


gene id symbol gene type direction distance location
XLOC_035948 NA coding upstream 2405 45433272 ~ 45437216 (+)
XLOC_035947 tti2 coding upstream 44306 45381298 ~ 45395315 (+)
XLOC_035946 chmp4bb coding upstream 64513 45361735 ~ 45375108 (+)
XLOC_035945 pabpc1l coding upstream 87402 45334255 ~ 45352219 (+)
XLOC_035944 ubap2b coding upstream 110969 45293743 ~ 45328652 (+)
XLOC_035950 CU695141.2 coding downstream 3922 45444493 ~ 45445030 (+)
XLOC_035951 NA coding downstream 8299 45448870 ~ 45451410 (+)
XLOC_035952 NA coding downstream 28423 45468994 ~ 45472217 (+)
XLOC_035953 NA coding downstream 160344 45600915 ~ 45604655 (+)
XLOC_035954 BX088696.2 coding downstream 167969 45608540 ~ 45610783 (+)
XLOC_035943 NA non-coding upstream 215345 45223476 ~ 45224276 (+)
XLOC_035941 NA non-coding upstream 283454 45154888 ~ 45156167 (+)
XLOC_035938 NA non-coding upstream 559220 44877975 ~ 44880401 (+)
XLOC_035936 NA non-coding upstream 692648 44744833 ~ 44746973 (+)

Expression



Co-expression Network