XLOC_035966 (pimr186)


Basic Information

Item Value
gene id XLOC_035966
gene name pimr186
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 46552778 ~ 46555161 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00070459
CAGGAAACCACATTCAACTGGGAAGGAAATACAGgTAGAATCTCCCAGGACTATAAAATCCTTCACTTGATTGGTCAAGGATCAACAGGAGTCATCTATGAAGGAATCCGTCTGTCGGATTGCCGAATGGTGGATATCAAATGCGTGAAGAAGACAAAATCAATGGAAAGGATCACGATTGAACCATCTGACAAGACTGTTCCACAAGAGGTCGGTTTGATGACTATGATGAGCAGAGGTCCGAAGGTTCCTCAAGTAATACAGCTGCTGGACTGGTATGAGGCACCAGACCAATACATACTGGTGCTGGAGCATCCCAAAGCAGCTGTGAGCCTGGACCAGTTTGTATCCTCTTGCGGGAACAAAATCAGCGAAGCGAAAGCACGAGTGGTGATGCACCAGGTGATCACTGCTGCCAACGCATGCTGCGAAAGGGGAGTCTACAATAACATCAAGCTGGAGAGCCTGCTCATCAACCCCCACACCTTGCAGGTCAAACTGATGGACTTTGGCACCGGAAGCCGCATGAAGGATACTGGCTATAAAACATTTTGGGGCTCAAGGGCTTGTATTCCCCCGGAGTTCTATCAGAAGGGAAGGTTCCACGCCAAGCCTGCAATCGTGTACTCTTTAGGCAAACTGTTGTTCAGGATGCTGTGTGGACGCTACCCTCATGTGGACCTCCACAAGATTGTCAAAAGAACCTGGCAGCCTGAAGACCTATCCAAAGAAGCCGTAGATCTGATCTGCTCGTGTCTGCAGAGTAAGCCAGACAAGCGGCTTTCACTTGACGAGATCCTTCACCAGAGGTGGTTCCAGGTCTTCATCCTGAAGCCAAACAACAGACGAAAAGATTAAGAAGATCAGAACATCCAGCCTCTTCATCCAGCCGTCAACACCAAACTTCTCCTCTTCATCGATCCACTAACACCGAACTCCTCCTCTTCATCCAGCCGCTAACACTAAGCTCCTCTTTTATATTCAGCCAGAAACTCCGTCAAGCCACGAACATGGGGCAGTTTGTGGCTTTACGAAGAGAAAAAGCTGAATGGGGCTGGTGTTTGTGGTTGTGTGGGAAGGAGGAGCTGTTTGGGGCCGGTGTTTGTGGTTTGATAAAGAGGAGGAGCTGAAGGGGGCCGGCGTTTGTATCTGGATGAAGAGAAgaagattttttgtttatttttggagattgtaaataaatgcTTGTTCTGTatgtaatgaataaaaatgaatacttTTCACATATAAA

Function

symbol description
pimr186 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-162 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000095734

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00070459 True 1249 mRNA 0.47 6 46552778 46555161

Neighbor

gene id symbol gene type direction distance location
XLOC_035965 pimr187 coding upstream 13500 46536893 ~ 46539278 (+)
XLOC_035964 si:ch211-196g2.4 coding upstream 119023 46418996 ~ 46433755 (+)
XLOC_035963 ogg1 coding upstream 146396 46386601 ~ 46406382 (+)
XLOC_035962 si:dkey-75a21.2 coding upstream 204188 46327350 ~ 46348590 (+)
XLOC_035961 angptl7 coding upstream 331482 46217861 ~ 46221296 (+)
XLOC_035967 tas1r2.2 coding downstream 32432 46587593 ~ 46597751 (+)
XLOC_035968 tas1r2.2 coding downstream 54859 46610020 ~ 46619620 (+)
XLOC_035969 her3 coding downstream 86153 46641314 ~ 46642556 (+)
XLOC_035970 NA coding downstream 153059 46708220 ~ 46709848 (+)
XLOC_035971 FO704898.1 coding downstream 211268 46766429 ~ 46766545 (+)
XLOC_035960 NA non-coding upstream 406076 46045163 ~ 46146702 (+)
XLOC_035957 CU137648.1 non-coding upstream 780159 45767653 ~ 45772619 (+)
XLOC_035955 NA non-coding upstream 809873 45731192 ~ 45742905 (+)
XLOC_035954 BX088696.2 non-coding upstream 941995 45608540 ~ 45610783 (+)
XLOC_035953 NA non-coding upstream 948123 45600915 ~ 45604655 (+)
XLOC_035973 BX000472.2 non-coding downstream 505240 47060401 ~ 47060515 (+)
XLOC_035974 BX000472.1 non-coding downstream 517059 47072220 ~ 47072337 (+)
XLOC_035976 CR792439.1 non-coding downstream 599501 47154662 ~ 47159033 (+)

Expression


Co-expression Network