XLOC_035967 (tas1r2.2)


Basic Information

Item Value
gene id XLOC_035967
gene name tas1r2.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 46587593 ~ 46597751 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00070460
ATGCTTCTTGATAGCAATTACATTTTCCTTTTGGgatttattaatagtttatttttcaatttttgttCCTTAGCATCAGACTTCAGCTTGGAAGGAGATTTCTTATTGGGTGGTCTTTTTCCCTTACATGAAATCGACCAAGTGACCCCCGTTTTTACGCCAGAGACTACTGAATGCTTTAGGTACACTGCCTCACCATCTGGCTTTCAGATGTTGCAAGTAATGAGGTTTGCCGTTGAAGAGATTAATAATTCCAGCACTCTTCTGCCCAATGTTTCCCTGGGCTATGAATTGTTTGACCATTGTTCAAATACTAGGAATTTCGGTTCACTTTTAAGTTTCATCTCAAAAAATGGATCCATTAAACCTAAAGTAAAACGCATCAACTATCAATCTGATGTGATCGCTTTAACAGGGCCATATGGAAGCACACGGACTATTTCAATAGCACCACTGATCACAATGGACCTTATACCATTGGTGAATTATGGAGCTTCAAGCTCTGTGTTAAGCAATAAACTTCAGTATCCCTCTTTTGTAAGAACAGTGCCCAGCAACAAAGACATGATAAATATGATTATCCACATGATACGGTGGTTTGGATGGAACTGGGTCGCCTTTCTTGGTAGCAAAGATGCTTATAGTACAGATGGACTGAATCTGTTTAACACCTACATAAACAACACTGGCATTTGTGTGGCCTATCAAGAACGTCTAAACCTTGATGCAAACTACAGTCAGACACTTAAAAAGATTGATATGCTTAACATCAATGTCATTGTGGTGTTTGCTGTGCCACAATATGCAGTCAACATAATCAATACTGCCATAGCGGACAACATCCGAGACAAAGTATGGATTGCGAGTGAAACCTGGTCTATGAATCAACAGCTTCCAAGGGAGCCAGGAGTTGAGAAAATCGGAACAGTCATTGGCATTACAGACCGATTGTTGACATTACCTGGATTTAATGAATTCATCCTTAAAGATATGGGGACGGCTAATGTTAATGCCAGTAAATTCCAGACAAATACATGTAATCAGAATTGTGATTACTGCCCATCGTTGACAGCAGAAGACATTATTAACGAGAATCCCTCATTCTCCTTCGCTATCTATGCTGCCATGTATACCATAGCTCATGCGTTACATAAAGTTTTGCAATGTGACACAAAAGGCTGCCCGAAAAATACACCATTTGAGCCATATATGCTTCTGGGAGAGATGAAAAAACTGGATTTTCCACTCAATGGACGACAAGTGAAATATGATAAAAATTATGATCCACCCATCAGTTATGCTGTTGTACTCTGGCACACAGATGAGAATTCCCCACAGTTTGAGATGGTGGGCACGTATGACACATATCCAAAAACTGTTTTTACCATTGACAACTCGCGCTTTCCTTGGCGTAACGATTCTATCCCTTTCTCAAACTGCTCTGTTGAGTGTAAACCGGGATTCGCAAGGCAACCTGAAGGTTTTCATAGTTGCTGTTTTACGTGTAAAAAATGCCCACGTAACAGCTATGTGGATTATTCACAGGATCCCTATACGTGCTTTCCATGTGCGGTGAGTGATTGGTCTGATGAGGGCAGTACAGCATGTAAGACACGAGCTGTTGTCTACCTCGAGTTTACAGAAATCACCTCAATTGCTGTCATGATTTCTGTCTCGTTCCTTATTATTCTTCTTATTGGCATATTTGGCCTTTTCGCCTACAATTTCAACACACCCGTGGTGAGGTCTGCTGGCGGAGGCATGTGTCTCCTAATGTTGCTCTGCCTGACTATTTCTAGCATAAGTGTGTTCTTTTTCTTTGGAAAACCGTCATCTGTACATTGCCTCGTGAGAAATGCCATATTTGCTTTTTTCTTCACTGTCTGTCTTTCATGTTTGACTGTTCGTTCTTTTCAGATTATTTGCGTTTTTAAAATGGCTGCTCAGTTCCCTAGATTGCACAGCCTATGGGTTAAACATAATGGCCAATGGCTATTTATTgcattttcttcatttattcacttaATTTCTTGTGTGATATGGACGACTGTCTCTCCTGATATACCCATCGCTGACTCGTGGACTTTTAAAGATCAAACTCTTCTCATGTGTGAAATGGTAAACACTATCACTTTTACTGTAGTTTTGTTTATAAGCTGGTTTCTCGGTTTCCTGTGTCTCGTGTTTTCATACATGGGAAGAGATCTGCCAAAAAATTACAATGAGGCCAAATCAATAACCTTCAGTCTCATTCTGTACTATCTGAGCTGGATTGTGTACTTCACCGCATACCTCTCAATCAAAAGTAAATACATTATGCTTCTGAACGCAATGGCCCAGATATCTAGCATTTATGGAATCCTCTTCAGCTATTTCATTCCAAAATCTTACATAATGATATTCCAGCCACAGAAGAACACTGCTGCATACTTTCAGACATCTATTCAAAATTACACTCAAACCATTAGTAGGTCTTAG

Function

symbol description
tas1r2.2 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in gill raker; mouth; and pharynx. Orthologous to human TAS1R2 (taste 1 receptor member 2).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070917-2 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in gill raker; mouth; and pharynx. Orthologous to human TAS1R2 (taste 1 receptor member 2).

Ensembl:

ensembl_id ENSDARG00000053135

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00070460 True 2478 mRNA 0.40 6 46587593 46597751

Neighbor

gene id symbol gene type direction distance location
XLOC_035966 pimr186 coding upstream 32432 46552778 ~ 46555161 (+)
XLOC_035965 pimr187 coding upstream 48315 46536893 ~ 46539278 (+)
XLOC_035964 si:ch211-196g2.4 coding upstream 153838 46418996 ~ 46433755 (+)
XLOC_035963 ogg1 coding upstream 181211 46386601 ~ 46406382 (+)
XLOC_035962 si:dkey-75a21.2 coding upstream 239003 46327350 ~ 46348590 (+)
XLOC_035968 tas1r2.2 coding downstream 12269 46610020 ~ 46619620 (+)
XLOC_035969 her3 coding downstream 43563 46641314 ~ 46642556 (+)
XLOC_035970 NA coding downstream 110469 46708220 ~ 46709848 (+)
XLOC_035971 FO704898.1 coding downstream 168678 46766429 ~ 46766545 (+)
XLOC_035972 espn coding downstream 341640 46939391 ~ 47088528 (+)
XLOC_035960 NA non-coding upstream 440891 46045163 ~ 46146702 (+)
XLOC_035957 CU137648.1 non-coding upstream 814974 45767653 ~ 45772619 (+)
XLOC_035955 NA non-coding upstream 844688 45731192 ~ 45742905 (+)
XLOC_035954 BX088696.2 non-coding upstream 976810 45608540 ~ 45610783 (+)
XLOC_035953 NA non-coding upstream 982938 45600915 ~ 45604655 (+)
XLOC_035973 BX000472.2 non-coding downstream 462650 47060401 ~ 47060515 (+)
XLOC_035974 BX000472.1 non-coding downstream 474469 47072220 ~ 47072337 (+)
XLOC_035976 CR792439.1 non-coding downstream 556911 47154662 ~ 47159033 (+)

Expression


Co-expression Network