XLOC_036067 (nadka)


Basic Information

Item Value
gene id XLOC_036067
gene name nadka
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 53064920 ~ 53069540 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00070590
AGGAAATGCTGCACTCGTCCTGCGCAGCCGTCTGCAGGTCACAGTAGTGAAAGCGGTTCGAGAGAAGGGACCGGCGGAGGAGAACAGTTTAAAGCTTACTAATGGAGACGCTGAACCCAACCACAAAACTATGCAGTATCAAGTGCTGAATGAAGTTGTTATAGACAGAGGGCCGTCTTCATACCTCTCCAATGTAGACTTGTTTCTGGATGGTCACCTGATCACCACGGTTCAAGGAGACGGAGTGTTGGTGTCGACTCCCACTGGAAGCACAGCTTATGCAGTGGCAGCCGGAGCCTCCATGATCCACCCAAACGTGCCCGCCATCATGATCACTCCCATCTGCCCGCACTCTCTGTCCTTCAGACCCATCGTGGTTCCAGCCGGCGTGGAGCTTAAGATAATGCTGTCCCAGGACGCCCGAAACACGGCCTGGGTGTCGCTCGATGGCAGGAGACGCCAGGAGATTGCATGCGGAGACAGTATCACCATCACCACATCGTGTTTCCCTCTTCCGTCCATCTGTTTCCGTGATCCGGTGAACGACTGGTTCGAGAGTCTGGCTCAATGTTTACACTGGAACGTCCGCAAGAAGCAGAGTCACCTCTGTCTAGAAGAGGAGGATTTCTGACACATTCCGCCAAACCGCTTCACTGTCTGACACCATTCAATCCCACACAATCAACCAGGTCGCAATTCATCTTACCAAAATAAAAGAACATTTTGCTTTAAA

Function

symbol description
nadka Predicted to enable NAD+ kinase activity. Predicted to be involved in NADP biosynthetic process. Predicted to act upstream of or within NAD metabolic process and phosphorylation. Is expressed in EVL; ectoderm; epidermis; periderm; and presumptive ectoderm. Orthologous to human NADK (NAD kinase).

GO:

id name namespace
GO:0006741 NADP biosynthetic process biological_process
GO:0019674 NAD metabolic process biological_process
GO:0003951 NAD+ kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050417-39 Predicted to enable NAD+ kinase activity. Predicted to be involved in NADP biosynthetic process. Predicted to act upstream of or within NAD metabolic process and phosphorylation. Is expressed in EVL; ectoderm; epidermis; periderm; and presumptive ectoderm. Orthologous to human NADK (NAD kinase).

Ensembl:

ensembl_id ENSDARG00000098313

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00070590 True 733 mRNA 0.52 5 53064920 53069540

Neighbor

gene id symbol gene type direction distance location
XLOC_036066 nadka coding upstream 2903 53051701 ~ 53062017 (+)
XLOC_036061 NA coding upstream 36251 52997540 ~ 53028669 (+)
XLOC_036065 dre-mir-181b-2 coding upstream 41156 53023679 ~ 53023764 (+)
XLOC_036064 dre-mir-181a-2 coding upstream 41303 53023539 ~ 53023617 (+)
XLOC_036063 NA coding upstream 45440 53018176 ~ 53019480 (+)
XLOC_036068 wdr46 coding downstream 10975 53080515 ~ 53096754 (+)
XLOC_036069 nr2c2 coding downstream 50738 53120278 ~ 53142068 (+)
XLOC_036070 NA coding downstream 73671 53143211 ~ 53152093 (+)
XLOC_036071 cacna1db coding downstream 134477 53204017 ~ 53260670 (+)
XLOC_036072 gnb1a coding downstream 200117 53269657 ~ 53334650 (+)
XLOC_036062 NA non-coding upstream 47363 53017077 ~ 53017557 (+)
XLOC_036078 CU638702.1 non-coding downstream 426661 53496201 ~ 53498302 (+)
XLOC_036080 NA non-coding downstream 826546 53896086 ~ 53896991 (+)
XLOC_036083 CABZ01066578.1 non-coding downstream 958142 54027682 ~ 54034515 (+)
XLOC_036086 NA non-coding downstream 1044496 54114036 ~ 54134106 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000050_02268620_02283626 NADK, NADKA coding CI01000050 null 2268620 ~ 2285331 (+)