XLOC_036208 (zgc:113363)


Basic Information

Item Value
gene id XLOC_036208
gene name zgc:113363
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 7839208 ~ 7851590 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00070795
AGATGCGGCTCGCTCTCCCTGACGGACATCACACATACGTTCATTCTGCATTAAAGTGAGTTTTAAAATCCTCGGTACAAGACTGGAGTTATTCGAGTTAAGAGTTCGAGTCAAGCGTCTCAAATGGAGACAGAAGCCATGGATGTCCAACAGCAGGACGGAGGGCAGGACAGTCCTGTTCACACAACACAACCAAAGGCCACCGGCAAACCTGAAGACACAGGTCCTGTCCTGACTGAGACTGTTCACAGCGGAAGCAACGAGTCGCTGATAGATGGTGTTACAACCAGTGATGATGCTTTACTGCTTCCTGATCATATACCTACAATTTCACACAAAATAGATAAAGGCAATGTGAAGCCCTGTCTTCCCAATGGCACTTCTCCAGTAGTCAATGGGTGCGCTGTGACCTGTTCACCTCCTGCTTCTTCACCACAAGTTTCGACATCTCGTCCTGCAGCACAACAGAAATGCAACCCACATGCAAAATGCAACGGACACAAACAACCTCCCAGAAAACAAATGTCCTCCACCTCCCAGAGCCAGAAGAGTTTCAACGGCGATGCGACTCAGATTCAGAGAGTGGCTGGAGATGattgCTGTGCGCACTGTATACTGGCCTGCCTGTTCTGCGAGGTGCTGTCCTGGTGTTCGGCCGTGGCTCAGTGTTTGGCCTGTGGTCTAGAGTGTGATGCTCTCTGCTGCTGTGGTGAAGCGGCCGGCGGAGGTCTGGCCTGCTGCGCTGAGGACTCCTGCTCTGCCCTGCTGGATTGTGGGATACTGGAGGACTGCTGCCAATCTTCAGACTGTCTGGAGATCTGCTTGGAATGCTGCTCCATCTGTTTCCCTGCCTGAAAACACAATGATATCAAGCACTCGAAGGACTGTAAGCATCGGGATTTACAGTATCTTTTATTGTTTATCctgcattttgtatttattttgtatgaaGAATTCATTTGTTGGACTGTTCTGCACGAGGTTACTTTCTGAATTCTGACAAGCCATACAACCAAAATCAAAAGGTTTGCTGTTACTCACCCCTTTATCCAAGATgtaggtttattattattatttttattgtcagcAGGGAGAgcaagtattgaacacgtcatgtttttttctgggaataatatttctaaaggagctgttgacaaggagttgaaccagattttggtaaaaaccccaaaaatacaaacattaaactataacaaaactaaaatctgaaaaataagttCTGTGTAATTACAATCGAATGACAGAAAGAGAAAGTCCTGAACTCAGGTTTTTCTGAGTTTTTCCACAGACTTTAACAGTGTAaagatcttgatggttctgtgggtctcgtctattaaatctgatctagcattttctattggattcgagtTAGgcaattggctgggccattctacagctggattttctttctctgaaagcatttgagagtttccttggctgtgttttggatcatgtgataataaaaatgtgtgtaaatggacaaaccagcaggctgagcacatcgGACTAGAACCTCTTCGTCACAGTCAACTCTGCTCCGCATCCCAGGTCCGCCGACATACACGGCAAGCTACTGGGTAGACTGGTAACACCAGAAAGGCCACCCATGCGGAGGTAAGTAGTCAGCTGGTAGCACGAAAAGGAACAGAAGCCGTTAGctgcatcataccgccctgtagcgttcattttaaagacgaaattcATTTAGACGGACCTCTGGCTACAAAATTCGTGCTCTAGAGAATTGTATACAGGAGTACATCtacacaatgagcctgtgttgacatttttgcaaatctgaaataggTTACTTTGGGTGCATTTTGTTATATGTTTTGGATACACATCTCTCTTGTACATGTCAAGGAGAAGGCGGAGCTTGTCATACAGATTACCCAGCGAACCACTGACTTAAACCtctccctaaacctaaccaatagtgttgTTAAAAGCATATGTTGGAGAAAAGACATATTCGATAATATATAGTAGACAATGTCacgttgttttgtggtatttatgtatgtggtgttgtgcaaagaactgcatgaaaataataaattattcttCAATAATATGTTCCTGTTAATATCATTAGTGAGAAAATGAACAGAAGTTGTTGACGTCATACCGCCTTGTAGTGTTCATTTCGCCTAAAAATTGcaattaaacatgttaaagtacttttttgcagttttaggcaaggcaagtttatttatatagcacatttcatacacagtggcaatacaaagtgctttacataaacaagaataaaagaaacaag
>TCONS_00070796
AAGCGTCTCAAATGGAGACAGAAGCCATGGATGTCCAACAGCAGGACGGAGGGCAGGACAGTCCTGTTCACACAACACAACCAAAGGCCACCGGCAAACCTGAAGACACAGGTCCTGTCCTGACTGAGACTGTTCACAGCGGAAGCAACGAGTCGCTGATAGATGGTGTTACAACCAGTGATGATGCTTTACTGCTTCCTGATCATATACCTACAATTTCACACAAAATAGATAAAGGCAATGTGAAGCCCTGTCTTCCCAATGGCACTTCTCCAGTAGTCAATGGGTGCGCTGTGACCTGTTCACCTCCTGCTTCTTCACCACAAGTTTCGACATCTCGTCCTGCAGCACAACAGAAATGCAACCCACATGCAAAATGCAACGGACACAAACAACCTCCCAGAAAACAAATGTCCTCCACCTCCCAGAGCCAGAAGAGTTTCAACGGCGATGCGACTCAGATTCAGAGAGTGGCTGGAGATGattgCTGTGCGCACTGTATACTGGCCTGCCTGTTCTGCGAGGTGCTGTCCTGGTGTTCGGCCGTGGCTCAGTGTTTGGCCTGTGGTCTAGAGTGTGATGCTCTCTGCTGCTGTGGTGAAGCGGCCGGCGGAGGTCTGGCCTGCTGCGCTGAGGACTCCTGCTCTGCCCTGCTGGATTGTGGGATACTGGAGGACTGCTGCCAATCTTCAGACTGTCTGGAGATCTGCTTGGAATGCTGCTCCATCTGTTTCCCTGCCTGA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-050327-7 No description available

Ensembl:

ensembl_id ENSDARG00000101206

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00070795 False 2302 mRNA 0.43 5 7839208 7851590
TCONS_00070796 True 743 mRNA 0.53 4 7840655 7847921

Neighbor

gene id symbol gene type direction distance location
XLOC_036207 NA coding downstream 60996 7745910 ~ 7778212 (-)
XLOC_036206 mecp2 coding downstream 201568 7616573 ~ 7637640 (-)
XLOC_036205 irak1 coding downstream 235508 7571095 ~ 7603700 (-)
XLOC_036204 hcfc1b coding downstream 271393 7506827 ~ 7567815 (-)
XLOC_036203 cdk20 coding downstream 335007 7494941 ~ 7504201 (-)
XLOC_036209 NA coding upstream 27101 7878691 ~ 7878934 (-)
XLOC_036210 NA coding upstream 55681 7907271 ~ 7912935 (-)
XLOC_036211 NA coding upstream 239680 8091270 ~ 8094049 (-)
XLOC_036212 NA coding upstream 487203 8338793 ~ 8340951 (-)
XLOC_036213 tsr2 coding upstream 489492 8341082 ~ 8349653 (-)
XLOC_036198 CU302304.1 non-coding downstream 680611 7158483 ~ 7158597 (-)
XLOC_036195 NA non-coding downstream 850014 6987511 ~ 6989194 (-)
XLOC_036192 NA non-coding downstream 943064 6892222 ~ 6896144 (-)
XLOC_036188 CR749774.1 non-coding downstream 1230045 6589486 ~ 6609163 (-)
XLOC_036216 CR457452.2 non-coding upstream 668452 8520042 ~ 8520173 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00009756 NA coding CM030126.1 CM030126.1 45457812 ~ 45458370 (-)