AMCG00009756


Basic Information

Item Value
gene id AMCG00009756
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45457812 ~ 45458370 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009756
ATGGCACAGGGTGGCAACCGCTGTGTGCACTGCGTCCTGGCCTGCCTGTTCTGTGAGCTGCCCTCTCTGTGCTCCGCGCTGCTGCTCTGCCTGGCCTGTGGGCGGGGCTGCGGGGGCGGGGGCTGCTGTGGGGGCGGGGCCTCTGGGGGCGGGGGCGGTGAGGACGTCTGCTCCACCGGGGTGGATTGTGGGATACTGGAGGACTGCTGCCAGTCGTCGGACTGCCTGGAGATCTGCTTCGAGTGCTGCTCCATCTGCTTCCCTGCCtaa

Function

GO: NA

KEGG:

id description
ko00071 Fatty acid degradation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009756 True 270 mRNA 0.69 2 45457812 45458370

Neighbor

gene id symbol gene type direction distance location
AMCG00009754 NA coding downstream 55397 45397189 ~ 45402415 (-)
AMCG00009745 mecp2,LOC105898998 coding downstream 106632 45345981 ~ 45351180 (-)
AMCG00009744 NA coding downstream 139484 45315275 ~ 45318328 (-)
AMCG00009746 LOC105912249 coding downstream 152439 45287018 ~ 45305373 (-)
AMCG00009747 cdk20,LOC107727427 coding downstream 174792 45281202 ~ 45283020 (-)
AMCG00009767 NA coding upstream 219871 45678241 ~ 45678855 (-)
AMCG00009771 smc1a coding upstream 225190 45683560 ~ 45695262 (-)
AMCG00009770 hsd17b10 coding upstream 243563 45701933 ~ 45704510 (-)
AMCG00009768 huwe1 coding upstream 247497 45705867 ~ 45738830 (-)
AMCG00009773 fam120c coding upstream 304807 45763177 ~ 45771249 (-)
G58904 NA non-coding downstream 84740 45372758 ~ 45373072 (-)
G58903 NA non-coding downstream 112553 45339500 ~ 45345259 (-)
G58902 NA non-coding downstream 118394 45337155 ~ 45339418 (-)
G58901 NA non-coding downstream 120928 45332215 ~ 45336884 (-)
G58807 NA non-coding downstream 215879 45219629 ~ 45241933 (-)
G58940 NA non-coding upstream 15165 45473535 ~ 45554714 (-)
G58979 NA non-coding upstream 124136 45582506 ~ 45583007 (-)
G58978 NA non-coding upstream 126433 45584803 ~ 45585371 (-)
G58982 NA non-coding upstream 133377 45591747 ~ 45629373 (-)
G59002 NA non-coding upstream 176312 45634682 ~ 45635314 (-)
AMCG00009748 NA other downstream 131757 45320757 ~ 45326055 (-)
AMCG00009742 NA other downstream 180215 45251637 ~ 45277597 (-)
AMCG00009739 NA other downstream 227355 45168941 ~ 45230457 (-)
G58653 NA other downstream 672678 44782918 ~ 44785134 (-)
G58589 NA other downstream 890978 44566069 ~ 44566834 (-)
AMCG00009755 NA other upstream 373 45458743 ~ 45465377 (-)
AMCG00009766 srpk3,LOC107601770,LOC107674354 other upstream 179377 45637747 ~ 45642744 (-)
AMCG00009769 phf8,LOC107563633,LOC106567021,LOC107716077 other upstream 290306 45748676 ~ 45757951 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_036208 zgc:113363 coding NC_007119.7 CM002892.2 7839208 ~ 7851590 (-)