AMCG00009744


Basic Information

Item Value
gene id AMCG00009744
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45315275 ~ 45318328 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009744
CCCCCCGCGCCCCTGGACTCTCTGGCCGAGAGCTTCTCCAGGCTGGGGCCCCGAGAGGACACCTACTACtgccccccccagcccagcGACCGCCCTGCCACTGCCACCACCCCCTGGCGGGACGGCCTCTATCTCTCCAAGTCACAGGGGGGGGAGCCGCAGACGCCCTGTGAGTCGGATGAGAGTCAGGGCTACTCCCAGTACCTGCTGAGTGAGCCCAGCCCCTCCAGCTCCCTCTACGCCTCCCCCGCAGACTGCCCGTCCCCGGACCCCCTCGCAGGGCTGCGCCGGCCCCCCACacaggctgctgctgcctcCACCTCTGCTGAGAGCTGCCAGCCAGCAGGGCATGGCATCGTGATGAACCCGGCAAAGGAGCAGTTCTTCAGGAAGCTGGCTCTGTATGAACAGGGCCTCCTGCCCAGCGCCGAGCTACTGTCCACCACTGAGCTGTCCGGGTCTCTGTACAGGGAGGACCGAGGACCAGAGGAGAGCGACGAGTTCCAGTGctgaatcacacacacacacacaatagttCTCAGTACACAATGGTACACAGCATTCAATCAGTGGTACAGCTATACAAATAGAAATAgacttatatttttatatatatatatggtatttaacaatacagtatttaacaCAACAGTTTGTGACAAACGATTGAGTGTCCTTGAGTTTCTGTTTCTTTCCAAACCACTGACTCTGAGATGTGCCGGGGGAGGTTCAAATATAGGTAGGTGTGGGTGTGTACCCCCCAAGACTCACACCCATCTAACAacaggcgagagagagagaaccattGACCATGATTTAAACTGGAACATCCAGGTCTGTTTGCTCTTGGGGGAAACGCTGCCAAATACCACATTGTGGGCCGAGCCCCCCAGTGGTGGAGGGGGGATCGTTCCTGACCGGCCAACAGGAATCGACACGGGAGTGCTACACGCTCTGCCTCCCGGGCTGTGGGGGGGTCCTCTGGGAGTCGGGGGGCCCGGAGCGGTGGGAGATTCCGAATTAAATGAATCCGCTTTGTGTTTTCGTGTTGGTTGTGGTTCGAGTCAGAAGAAGCTGCTGTGCACATGAGCAATGGTGCGTTTTATTGTCGAgattgtcattatttttcttacacACTATACATATCTGTCTGTATGAGTATTTATCCCTCGTCCTGGACTGGATCCAAACTgactttaattcaaataaacaatattcatGTAAAGACAAATCATGTACAGTTACATATACCTCCGTCAGGCGGTGGTTTGGGTGGCGctgtgttggggtggggggtgcagagAGGGGACTGAGGCTGGAGCAcggtgtgtgtttctgtctgtggtGACGGGGATTTTATGTCTTAATgaaagggaggtggggggtggaagGATACTCTCTCAGCTGTGACTAGGCGAATACTGACAGCGTTTCACATCACGAAGCAAGACTTACGTTCTCACTGGTacgagaccctgctggactggacagTCTCTCCAGGATCGCAATAAAGCGGCACAAactagttttaattttgttttgatgtaattttgttttaatttattgtggtGTTGGCCATCGTACTGCTTCCTCTTGATCATCATCCTGCATCGGCACGTCTCACTTTTAATCCTACAGCCAATGATCAATGCTTTGAAAGATGCTGGCCACCATGCTGTACTCTGCCAGACACTGGTTTTGGTGGGAGGGGAGTATGAGTCCGTTCAGTAAGGAGGACAGAGTTGTTGTTAATCAATCTAAACTATGTAATAAACACCgtccttcatttaaaaaataaataaacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009744 True 1805 mRNA 0.52 3 45315275 45318328

Neighbor

gene id symbol gene type direction distance location
AMCG00009746 LOC105912249 coding downstream 9902 45287018 ~ 45305373 (-)
AMCG00009747 cdk20,LOC107727427 coding downstream 32255 45281202 ~ 45283020 (-)
AMCG00009741 NA coding downstream 45663 45267403 ~ 45269612 (-)
AMCG00009740 NA coding downstream 68331 45245712 ~ 45246944 (-)
AMCG00009733 NA coding downstream 191271 45120311 ~ 45124004 (-)
AMCG00009745 mecp2,LOC105898998 coding upstream 27653 45345981 ~ 45351180 (-)
AMCG00009754 NA coding upstream 78861 45397189 ~ 45402415 (-)
AMCG00009756 NA coding upstream 139484 45457812 ~ 45458370 (-)
AMCG00009767 NA coding upstream 359913 45678241 ~ 45678855 (-)
AMCG00009771 smc1a coding upstream 365232 45683560 ~ 45695262 (-)
G58808 NA non-coding downstream 65255 45184361 ~ 45250020 (-)
G58807 NA non-coding downstream 73342 45219629 ~ 45241933 (-)
G58761 NA non-coding downstream 196051 45090217 ~ 45119224 (-)
G58724 NA non-coding downstream 315041 44998032 ~ 45000234 (-)
G58707 NA non-coding downstream 398386 44916631 ~ 44916889 (-)
G58901 NA non-coding upstream 13887 45332215 ~ 45336884 (-)
G58902 NA non-coding upstream 18827 45337155 ~ 45339418 (-)
G58903 NA non-coding upstream 21172 45339500 ~ 45345259 (-)
G58904 NA non-coding upstream 54430 45372758 ~ 45373072 (-)
G58940 NA non-coding upstream 155207 45473535 ~ 45554714 (-)
AMCG00009742 NA other downstream 37678 45251637 ~ 45277597 (-)
AMCG00009739 NA other downstream 84818 45168941 ~ 45230457 (-)
G58653 NA other downstream 530141 44782918 ~ 44785134 (-)
G58589 NA other downstream 748441 44566069 ~ 44566834 (-)
G58584 NA other downstream 772466 44541894 ~ 44542809 (-)
AMCG00009748 NA other upstream 2429 45320757 ~ 45326055 (-)
AMCG00009755 NA other upstream 140415 45458743 ~ 45465377 (-)
AMCG00009766 srpk3,LOC107601770,LOC107674354 other upstream 319419 45637747 ~ 45642744 (-)
AMCG00009769 phf8,LOC107563633,LOC106567021,LOC107716077 other upstream 430348 45748676 ~ 45757951 (-)

Expression


Co-expression Network