G58724


Basic Information

Item Value
gene id G58724
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44998032 ~ 45000234 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU73413
GAGAGTGAAGCCATTTTGATCTTTATTTGTCCACAGTGAGAAATGACAGTCCTCTCACCCTGTAACCCCCCCACAGCCCCATCTCTTTTTCTGGAAGACCACAATGCAGCATTACAAATGACAGCTCACTGGACATCTCTGTATCCTggatttgcatttgattttgaaaaagaTCTGCCCCCCCCGGCCACGCCTGCCTCCACTGCTTCCCCCAGCCTCACCCTCTCTTCTCACACAGAAAGCCCAGGTCCGGAAGCACAGCGATCGTGCTTCGGGTGACAATCCACATCAGTgttatttggaagaaaaaatataaataatcccATTTCAAACAGCATGTTAGCGCCATCTGCATCACGGCCGCTTTCCTGACTGCGCAGATGGCCGAGGAGGACAGAGGGCCAAGAAGACGAGTGGAGAGAGGCGTGACGGAGGAGAGTCCAGTCTGTCACCCTGAGccagtgtgcttgtgtgtgtgtgtgtgtgtgtgtcagtgtgcatcGTGGGATGCATCAGGTGGTCAATCTCTCTAGGGGTCAGGCAGTCAAGCTCAGCCCAtcggaaaaaaaatatattgtctgGCCGCAGTACAGCGAGTCGGCACCGCAGTGTCACAGCTTCTCTGGTCTCACTACtccaacaacacacacagttgCATTAAACgagacataaatacatacaaaattcaAGTAGACAAATTTAGGACCCACTCCCGTCACACCTCCGATACAGCACTCCCTGTGTCCcggcatcacactgcctccttTCCTATTTGGATTgatctatattttttaatcaggtACTTGTAGTAAAAACGCATTATTGTATAGAAATACTTTTTCTAAAGCGATTCAAGTTATTGCACACACAGCATGTTTCATTGGCCAATTACAGTAATATTGCTTCAGAAGGGTGGAGCAGGAACCCCACCGTATGGCCCAAACTCCTACAGACGAGCTTCACGACTCAAACTAGGAGACCTTTCTCATGTGGGCCGGCTTGACTGGGTCCTACAGCGCTCCCCCGACCCCCAGAGCGATAGAGCAGGTGGCTTGATTTCCCACATCAACTGAGACACCCACGTGCGTGTGCGTCGATATACATACAGGGTGATTTTTGATCTAAGCCTTTCAGCTGCTCATCAAATGAAAACGATCAGTACAAACCCTCACTGTTGATTTAATAAGTACCAGcacatacagaaaatacacGCCTCACTGCCACTCGATTGTCCTCGTCTTTGCGAGAGTCCAGGTCGAGCAGTGGAACCCCGCAGTGCAGTTTCTGTGGGGATCGAATGCCACCtcttgctctgtgtgtgtgaattagaGCTGGACTCTTAATATCGACCTGAATTCTCCTGAAATTTGAGATCACGTTGGTTAGAAAACTGTAAACTAATAGATGTAGCGTTTAGACATATGTGTATGGAATCCAACAGACTTAATTGCCTTTTGCACTGACACACGGCTCCAgggtggacagacagacagaccgaccGACACCCCACCCCACATATTACAACCCTCCCCCGCCAAGAACCTCGATTACAGCTCTGTTAAACACAACACCAAAAGCTCCGTCAACAGCTCCAACAGAGATCAAAcggaacaaaaatatatatttactgatcATCTACATTGGCAGCGACCTGACTTggtttttctcttcttccttctcgttaaaaaatgaaaatacaagaatcatcatcatcatcatagtaacgacaacaacaaaacaaatatgatttcATCTTCACAACAATGTAGTTTGTTAGAGACCGCCAGCAACGAATTCACACTCCAATCCCTCCATCTTCTCTGGCCCCATCTTGTACGGGTTTCCCCCAGTACTCCAAaagcccccacacacaccccgtGCCCCGCCCCACAACGGCAGTGAAAGAGCATCTCCTATTGGACGCAAGATCTGTCGATTCCCTCCGCAGAGTCCGGCAACGATACAACAGACCTGGGGATTCAGAAGACAGGAGACTGGAGACGAGGGATTGGACAGCGGGTGTGTGTAGGGCTCCGAGAGGGACACAGCCCCCCACCCTGGTCTGTGAGAGAccgggagagaggggagggagcgagagaaaagggacagagaagaggGCAGGGGAGGGTAGAGGAACCCCCACACCTCCCCATGTCATACACACGTAAAC

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0046031 ADP metabolic process biological_process
GO:0006090 pyruvate metabolic process biological_process
GO:0006096 glycolytic process biological_process
GO:0006165 nucleoside diphosphate phosphorylation biological_process
GO:0046939 nucleotide phosphorylation biological_process
GO:0009132 nucleoside diphosphate metabolic process biological_process
GO:0009135 purine nucleoside diphosphate metabolic process biological_process
GO:0006757 ATP generation from ADP biological_process
GO:0042866 pyruvate biosynthetic process biological_process
GO:0009179 purine ribonucleoside diphosphate metabolic process biological_process
GO:0009185 ribonucleoside diphosphate metabolic process biological_process
GO:0016052 carbohydrate catabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73413 True 2170 lncRNA 0.49 2 44998032 45000234

Neighbor

gene id symbol gene type direction distance location
AMCG00009717 NA coding downstream 21277 44969962 ~ 44976755 (-)
AMCG00009718 LOC106566500,LOC105009055,LOC102795717,LOC107584920,LOC107735484 coding downstream 70994 44922089 ~ 44927038 (-)
AMCG00009713 LOC107601746 coding downstream 189545 44789130 ~ 44808487 (-)
AMCG00009710 NA coding downstream 304499 44682664 ~ 44693533 (-)
AMCG00009705 NA coding downstream 340308 44656044 ~ 44657724 (-)
AMCG00009723 NA coding upstream 30683 45030917 ~ 45032715 (-)
AMCG00009725 LOC105419832 coding upstream 42612 45042846 ~ 45046433 (-)
AMCG00009724 LOC108265805,LOC108437579 coding upstream 57440 45057674 ~ 45087487 (-)
AMCG00009732 NA coding upstream 113199 45113433 ~ 45114885 (-)
AMCG00009733 NA coding upstream 120077 45120311 ~ 45124004 (-)
G58707 NA non-coding downstream 81143 44916631 ~ 44916889 (-)
G58699 NA non-coding downstream 104949 44892792 ~ 44893083 (-)
G58654 NA non-coding downstream 211260 44785604 ~ 44786772 (-)
G58613 NA non-coding downstream 332701 44665122 ~ 44665331 (-)
G58612 NA non-coding downstream 333087 44664738 ~ 44664945 (-)
G58761 NA non-coding upstream 89983 45090217 ~ 45119224 (-)
G58808 NA non-coding upstream 184127 45184361 ~ 45250020 (-)
G58807 NA non-coding upstream 219395 45219629 ~ 45241933 (-)
G58901 NA non-coding upstream 331981 45332215 ~ 45336884 (-)
G58902 NA non-coding upstream 336921 45337155 ~ 45339418 (-)
G58653 NA other downstream 212898 44782918 ~ 44785134 (-)
G58589 NA other downstream 431198 44566069 ~ 44566834 (-)
G58584 NA other downstream 455223 44541894 ~ 44542809 (-)
AMCG00009697 NA other downstream 485783 44501787 ~ 44512249 (-)
AMCG00009672 NA other downstream 1002378 43989511 ~ 43995654 (-)
AMCG00009739 NA other upstream 168707 45168941 ~ 45230457 (-)
AMCG00009742 NA other upstream 251403 45251637 ~ 45277597 (-)
AMCG00009748 NA other upstream 320523 45320757 ~ 45326055 (-)
AMCG00009755 NA other upstream 458509 45458743 ~ 45465377 (-)
AMCG00009766 srpk3,LOC107601770,LOC107674354 other upstream 637513 45637747 ~ 45642744 (-)

Expression


Co-expression Network