Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110500744 |
| gene name | grpel1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 54955547 ~ 54960002 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| grpel1 | Predicted to enable adenyl-nucleotide exchange factor activity and unfolded protein binding activity. Predicted to be involved in protein import into mitochondrial matrix. Predicted to act upstream of or within protein folding. Predicted to be located in mitochondrion. Predicted to be part of PAM complex, Tim23 associated import motor. Orthologous to human GRPEL1 (GrpE like 1, mitochondrial). |
| description |
|---|
| unnamed protein product |
| id | description |
|---|---|
| K03687 | GRPE; molecular chaperone GrpE |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021578271.2 | True | 1270 | mRNA | 0.51 | 4 | 54955547 | 54960002 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500891 | afap1 | coding | upstream | 447270 | 54349344 ~ 54508277 (+) |
| LOC110500735 | ablim2 | coding | upstream | 612966 | 54206483 ~ 54342581 (+) |
| si:dkey-219e21.4 | LOC106608570 | coding | upstream | 752645 | 54199722 ~ 54202902 (+) |
| LOC110500729 | md2l1 | coding | upstream | 885004 | 54067452 ~ 54070543 (+) |
| LOC110500727 | LOC106608576 | coding | upstream | 1064220 | 53736004 ~ 53891327 (+) |
| ccdc96 | ccdc96 | coding | downstream | 6232 | 54966234 ~ 54968068 (+) |
| LOC110500741 | LOC106595343 | coding | downstream | 22790 | 54982792 ~ 54986995 (+) |
| smim20 | NA | coding | downstream | 171966 | 55131968 ~ 55133176 (+) |
| LOC110500752 | NA | coding | downstream | 182222 | 55142224 ~ 55148988 (+) |
| LOC110500894 | rbpj | coding | downstream | 210374 | 55170376 ~ 55268660 (+) |
| G1753074 | NA | non-coding | upstream | 2366 | 54952931 ~ 54953181 (+) |
| G1753058 | NA | non-coding | upstream | 27521 | 54927746 ~ 54928026 (+) |
| G1753045 | NA | non-coding | upstream | 42396 | 54912895 ~ 54913151 (+) |
| G1753023 | NA | non-coding | upstream | 43573 | 54862839 ~ 54911974 (+) |
| G1752989 | NA | non-coding | upstream | 89347 | 54838289 ~ 54866200 (+) |
| G1753096 | NA | non-coding | downstream | 37954 | 54997956 ~ 55006936 (+) |
| G1753114 | NA | non-coding | downstream | 82883 | 55042885 ~ 55043313 (+) |
| G1753144 | NA | non-coding | downstream | 110929 | 55070931 ~ 55071130 (+) |
| G1753124 | NA | non-coding | downstream | 111555 | 55071557 ~ 55074587 (+) |
| G1753145 | NA | non-coding | downstream | 119291 | 55079293 ~ 55094050 (+) |
| LOC110500722 | NA | other | upstream | 1698946 | 53251413 ~ 53256660 (+) |
| G1751699 | LOC106608599 | other | upstream | 1983164 | 52962449 ~ 52972383 (+) |
| G1750050 | NA | other | upstream | 2758540 | 52191200 ~ 52197007 (+) |
| G1750030 | LOC106608688 | other | upstream | 2860442 | 52094709 ~ 52095105 (+) |
| G1753100 | NA | other | downstream | 41577 | 55001579 ~ 55011678 (+) |
| LOC110500754 | LOC106591080 | other | downstream | 630603 | 55590450 ~ 55592100 (+) |
| G1755158 | NA | other | downstream | 1426405 | 56386407 ~ 56387622 (+) |
| G1755570 | NA | other | downstream | 1833729 | 56793731 ~ 56794574 (+) |
| G1756789 | NA | other | downstream | 2966478 | 57926480 ~ 57928244 (+) |
