XLOC_036342 (acot11b)


Basic Information

Item Value
gene id XLOC_036342
gene name acot11b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 17993788 ~ 18010735 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071020
ATGGAGGTGGGAGTGTGTGCGGAGGCCTATCAGGGTGGAGAGCCTCTGCGACACATCAACACCGCCTTCATGACCTTTGAGGTCTTGGACAATGACAGGAAGCCATGCACATTGCCAAGGATTCGACCTGAGCCTGTGGATGGCAAGAGGCGCTTTCAAGAAGCCATAGCCAGAAAAAAAATCCGTCTTGACAGGAAATACATAATATCCTGTAACCAAAGTGAGGTTCCTCTGTCGGTTCCTTGGGACCCAAGTAATCAGATGTATCTCAGTTACAATAATGTTTCGGCACTTAAGATGTTGGCTGCCCGAACCAACTGGGTCTTGACCTCTGAGAAAAATAAGGTGAGTTTATACACTCTGGAGGAGAACCAGGTGTTGTGCTTTAAGGTGGAGACCCATGTGGCTGTTGCAGCTGAGCAGGTGTTTCTCCTACTGTCTGATCTAAGGCGAAGGAAGGCGTGGGACCACCACTACCagtatgtaaaatTAATAACAGACTCAAACGAAGACGACACCATCTACCGTGTTTTCACCCCTTCTGTGACTAAAGGAGGCAAAGGCCAGGACTTCATCCTCCTGGCATCCAGGAGGTGCCCTTGTGATTCTGGagaccCTTATTTGATTGCCTTGCGTTCTGTTACCTTGCCGGCGTATCCTCCCACCGAAGACTACAACAGAGGAGAGGTGCTCTGTGCTGGCTTCAGTATATGGGAAGAGGAAAACTCTTTCACTAAGATTTCATACTACAACCGGGCCACTCCTGGCGTGCTGCCCTACATCTCCACTGACATCGCTGGGCTTTCCTCCAGCTTCTACCGCACCTTTGCCTCATGTAGCGCTTTCCTGGAGAATAATAAAGACAGCCTGGCTTCTCTGCCCACCTCCATGCTGCGAGAAACCTCAAAGAGAAGCTGA
>TCONS_00071021
GGCTGTTGTGATAATAAAAAACTGAGAGAAATCGTTATGTTATGCGAACAAGGGAATTGAGCTGAATCATTCTCTTATATGTACTGGGCTTGAGGAGTCGAGCGCAGAGGGGACTCTGACTGGGAAAATGAATGTCTTATTGCGTATTTTAAGACATCTTGCAAAGATTCAGACAACACACAGACTTGTTTCCTTTTTCGTGTGAATGACAGCGCTACAAGATTAATTCACAGCCCTAGTCATGGCAAGTGAGACCCGGGATCCTGCACTGCTGCAAGAGCCTTCAGTGTTTATTCTGGAGAATGGGGAGATGTACAGAAACCAAACAGAAGTGAAGATGAGCCAGATAGTCCTTCCCTGCCATGCAAACCACTGTGGAGAACTGAGCGCTGGGCAACTGCTCAAGTGGATGGATTCCACCGCCTGCCTGTCTGCTGAGAGACATGCTGGCTGCTCCTGTATCACAGCCTCGGTGGATGATATTCACTTTGAAACCACCATAGGgatTGGACAGGTTGTGAACATTACAGCCAAAGTCAACAGAGCCTTTACATCCAGCATGGAGGTTGGGATTTCAGTGAGTTGTGAGGATCTCTTCAGTGACAGACAGTGGAAAGTCTGCCATGCTTTTGCCACCTTCGTTGCTCGTCGTACAGAAGCAGGAAAAGTACAGCTGAAGCAGGTGATTCCACACACGCAGGCAGAGCAGATGGAGTACAGCCTTGCCGCCGAGCGCAGGAGGATGAGACTAATCCATGCAGAGATAATTAACGATCTTCTTAGCAGCTGCTGCTCTCAGACAGTGAGTGAGTGTCTGGATTACCAGGATGCCGTGTCTGCAGAGAGGACTCGAGTAGAAAGCGTCGAGCTGGTGCTCCCGCCTCATGCCAATCACCAGGTCAGCACCTTTGGTGGACAAATCATGGCCTGGATGGAGAATGTAGCCACCATATCTGCCAGTCGCTTGTGTAATGCTCACCCAACTCTGCAGAGCATCGACATGTTCCACTTTCGTGGCCCCTCCCACATTGGAGACAGACTAGTGCTGAAGGCAATCGTAAACAATGCTTTCAAGAAAAGTATGGAGGTGGGAGTGTGTGCGGAGGCCTATCAGGGTGGAGAGCCTCTGCGACACATCAACACCGCCTTCATGACCTTTGAGGTCTTGGACAATGACAGGAAGCCATGCACATTGCCAAGGATTCGACCTGAGCCTGTGGATGGCAAGAGGCGCTTTCAAGAAGCCATAGCCAGAAAAAAAATCCGTCTTGACAGGAAATACATAATATCCTGTAACCAAAGTGAGGTTCCTCTGTCGGTTCCTTGGGACCCAAGTAATCAGATGTATCTCAGTTACAATAATGTTTCGGCACTTAAGATGTTGGCTGCCCGAACCAACTGGGTCTTGACCTCTGAGAAAAATAAGGTGAGTTTATACACTCTGGAGGAGAACCAGGTGTTGTGCTTTAAGGTGGAGACCCATGTGGCTGTTGCAGCTGAGCAGGTGTTTCTCCTACTGTCTGATCTAAGGCGAAGGAAGGCGTGGGACCACCACTACCaAGAGTGTGAAGTAATAACAGACTCAAACGAAGACGACACCATCTACCGTGTTTTCACCCCTTCTGTGACTAAAGGAGGCAAAGGCCAGGACTTCATCCTCCTGGCATCCAGGAGGTGCCCTTGTGATTCTGGagaccCTTATTTGATTGCCTTGCGTTCTGTTACCTTGCCGGCGTATCCTCCCACCGAAGACTACAACAGAGGAGAGGTGCTCTGTGCTGGCTTCAGTATATGGGAAGAGGAAAACTCTTTCACTAAGATTTCATACTACAACCGGGCCACTCCTGGCGTGCTGCCCTACATCTCCACTGACATCGCTGGGCTTTCCTCCAGCTTCTACCGCACCTTTGCCTCATGTAGCGCTTTCCTGGAGAATAATAAAGACAGCCTGGCTTCTCTGCCCACCT
>TCONS_00071022
GCCAAGGATTCGACCTGAGCCTGTGGTGAGCACTGTTGCATTCTTCAAATCTCTCACATGGTGGAAGAGTTTAACTTGTTGACTAGGAGATTCCAGGATGAGTTCAGTAGAGTGAAACTAAATGAATTCTAGAAATGAATGTTTtgcttggtgttttttttaaatgtccataaTCTTCTCATCCTTTCTTTTAAGGATGGCAAGAGGCGCTTTCAAGAAGCCATAGCCAGAAAAAAAATCCGTCTTGACAGGAAATACATAATATCCTGTAACCAAAGTGAGGTTCCTCTGTCGGTTCCTTGGGACCCAAGTAATCAGATGTATCTCAGTTACAATAATGTTTCGGCACTTAAGATGTTGGCTGCCCGAACCAACTGGGTCTTGACCTCTGAGAAAAATAAGATTATATAGGTAACTTGAGTGTACAAAAATGGTGTGTACACTTGAGAGAAATTTAT
>TCONS_00071023
CTCAGGTTGGGATTTCAGTGAGTTGTGAGGATCTCTTCAGTGACAGACAGTGGAAAGTCTGCCATGCTTTTGCCACCTTCGTTGCTCGTCGTACAGAAGCAGGAAAAGTAAAAAGCATCCAGTCCAACCAGTTCACAACAAATCCTTTTTACAACATCAAAtcagatctttaaaaaaaaacttggattTGGTCCATGTCTTGTTAGAGCTGTGATTTGGGTTTGCGCAGGTACAGCTGAAGCAGGTGATTCCACACACGCAGGCAGAGCAGATGGAGTACAGCCTTGCCGCCGAGCGCAGGAGGATGAGACTAATCCATGCAGAGATAATTAACGATCTTCTTAGCAGCTGCTGCTCTCAGACAGTGAGTGAGTGTCTGGATTACCAGGATGCCGTGTCTGCAGAGAGGACTCGAGTAGAAAGCGTCGAGCTGGTGCTCCCGCCTCATGCCAATCACCAGGTCAGCACCTTTGGTGGACAAATCATGGCCTGGATGGAGAATGTAGCCACCATATCTGCCAGTCGCTTGTGTAATGCTCACCCAACTCTGCAGAGCATCGACATGTTCCACTTTCGTGGCCCCTCCCACATTGGAGACAGACTAGTGCTGAAGGCAATCGTAAACAATGCTTTCAAGAAA
>TCONS_00071024
GGGACTCTGACTGGGAAAATGAATGTCTTATTGCGTATTTTAAGACATCTTGCAAAGATTCAGACAACACACAGACTTGTTTCCTTTTTCGTGTGAATGACAGCGCTACAAGATTAATTCACAGCCCTAGTCATGGCAAGTGAGACCCGGGATCCTGCACTGCTGCAAGAGCCTTCAGTGTTTATTCTGGAGAATGGGGAGATGTACAGAAACCAAACAGAAGTGAAGATGAGCCAGATAGTCCTTCCCTGCCATGCAAACCACTGTGGAGAACTGAGCGCTGGGCAACTGCTCAAGTGGATGGATTCCACCGCCTGCCTGTCTGCTGAGAGACATGCTGGCTGCTCCTGTATCACAGCCTCGGTGGATGATATTCACTTTGAAACCACCATAGGgatTGGACAGGTTGTGAACATTACAGCCAAAGTCAACAGAGCCTTTACATCCAGCATGGAGGTTGGGATTTCAGTGAGTTGTGAGGATCTCTTCAGTGACAGACAGTGGAAAGTCTGCCATGCTTTTGCCACCTTCGTTGCTCGTCGTACAGAAGCAGGAAAAGTACAGCTGAAGCAGGTGATTCCACACACGCAGGCAGAGCAGATGGAGTACAGCCTTGCCGCCGAGCGCAGGAGGATGAGACTAATCCATGCAGAGATAATTAACGATCTTCTTAGCAGCTGCTGCTCTCAGACAGTGAGTGAGTGTCTGGATTACCAGGATGCCGTGTCTGCAGAGAGGACTCGAGTAGAAAGCGTCGAGCTGGTGCTCCCGCCTCATGCCAATCACCAGGTCAGCACCTTTGGTGGACAAATCATGGCCTGGATGGAGAATGTAGCCACCATATCTGCCAGGTGTACAGTCACTGCTCTGTTAAAGTCATACAATCTCTTTTAGGATACtttatttctgttattaaattatttgttcgATTTAGCACGTTAAAAATGGAAACACTTCACTTAaagggggtgttttttttttaaggacagTCATAACACCTTTATAGTTATGACATGACATATGCTTGCTTATCACAAGTGTATTTCActgttatgacattttaaatgcaaagttgACATTTTTTGAGAATTTGACATAAATACATCATAACTTGACATTCATATGACAACTTGAAATTATCAAGACAGCATAActagtcataaatctgtcataaactgGAGTGTTATAAGGCCATTAcaattgtgtcatgaatatttttctgatcactttttcAGTGAAACTAAATGAACTTGTCAACCAAGGTTCAATCTAAAAATGTAtctctatatgcatttctggagaccaccaaatacgtcccaggagctacggtttttgcagttttttattttcgCTTATCTACCAGAGGccaatgtgtatgctttttgatctcaaaattctcttcagagtgccatttgcacctgctgttctcatgtaaatccaccagaggccgctgtcgattacctgtttgactgactgactgactgactgactgactgactgatcggttgacccaccatcctccttccataaacccaaccaatagtgttttaaaaagcacagattgacccgaccacccacttccctaaaccaaactgacaattttaaaaagcaatccagaaaaagaaaagcccttgtctgatttttaccatgttttaccacattgtcaacctgttatttactcgtttattttattttttggaggccgtccatatgaaggtaagcagtcagctgataAGCACaaaaaaa
>TCONS_00071025
GGCTTGAGGAGTCGAGCGCAGAGGGGACTCTGACTGGGAAAATGAATGTCTTATTGCGTATTTTAAGACATCTTGCAAAGATTCAGACAACACACAGACTTGTTTCCTTTTTCGTGTGAATGACAGCGCTACAAGATTAATTCACCAGAGCCCTAGTCATGGCAAGTGAGACCCGGGATCCTGCACTGCTGCAAGAGCCTTCAGTGTTTATTCTGGAGAATGGGGAGATGTACAGAAACCAAACAGAAGTGAAGATGAGCCAGATAGTCCTTCCCTGCCATGCAAACCACTGTGGAGAACTGAGCGCTGGGCAACTGCTCAAGTGGATGGATTCCACCGCCTGCCTGTCTGCTGAGAGACATGCTGGCTGCTCCTGTATCACAGCCTCGGTGGATGATATTCACTTTGAAACCACCATAGGgatTGGACAGGTTGTGAACATTACAGCCAAAGTCAACAGAGCCTTTACATCCAGCATGGAGGTTGGGATTTCAGTGAGTTGTGAGGATCTCTTCAGTGACAGACAGTGGAAAGTCTGCCATGCTTTTGCCACCTTCGTTGCTCGTCGTAC

Function

symbol description
acot11b Predicted to enable acyl-CoA hydrolase activity and long-chain fatty acyl-CoA binding activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid metabolic process. Predicted to be active in cytosol. Orthologous to human ACOT11 (acyl-CoA thioesterase 11).

GO:

id name namespace
GO:0006631 fatty acid metabolic process biological_process
GO:0006637 acyl-CoA metabolic process biological_process
GO:0005829 cytosol cellular_component
GO:0036042 long-chain fatty acyl-CoA binding molecular_function
GO:0047617 acyl-CoA hydrolase activity molecular_function
GO:0000062 fatty-acyl-CoA binding molecular_function
GO:0016790 thiolester hydrolase activity molecular_function
GO:0008289 lipid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-051127-37 Predicted to enable acyl-CoA hydrolase activity and long-chain fatty acyl-CoA binding activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid metabolic process. Predicted to be active in cytosol. Orthologous to human ACOT11 (acyl-CoA thioesterase 11).

Ensembl:

ensembl_id ENSDARG00000042122

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071020 False 918 mRNA 0.50 8 17993788 17997845
TCONS_00071021 False 1967 mRNA 0.49 17 17993820 18010735
TCONS_00071022 False 458 lncRNA 0.39 4 17995902 17997732
TCONS_00071023 False 640 lncRNA 0.49 3 18000382 18003684
TCONS_00071024 False 1746 mRNA 0.43 7 18001982 18010097
TCONS_00071025 True 571 mRNA 0.49 5 18003591 18010120

Neighbor

gene id symbol gene type direction distance location
XLOC_036341 fpgt coding downstream 6239 17983369 ~ 17987549 (-)
XLOC_036340 tnni3k coding downstream 13471 17958419 ~ 17980317 (-)
XLOC_036339 lhx8b coding downstream 66974 17921429 ~ 17926814 (-)
XLOC_036338 st6galnac5b coding downstream 171529 17800380 ~ 17822259 (-)
XLOC_036337 si:ch211-150o23.2 coding downstream 202823 17787308 ~ 17790965 (-)
XLOC_036343 dio1 coding upstream 28835 18039570 ~ 18042089 (-)
XLOC_036344 rps8b coding upstream 182381 18193116 ~ 18200003 (-)
XLOC_036345 elovl8b coding upstream 189598 18200333 ~ 18203342 (-)
XLOC_036346 CT025742.1 coding upstream 193382 18204117 ~ 18211605 (-)
XLOC_036347 armh1 coding upstream 203346 18214081 ~ 18229209 (-)
XLOC_036336 NA non-coding downstream 208877 17777860 ~ 17784911 (-)
XLOC_036335 NA non-coding downstream 332594 17659597 ~ 17661194 (-)
XLOC_036332 BX465215.1 non-coding downstream 741434 17252239 ~ 17252354 (-)
XLOC_036322 NA non-coding downstream 1380125 16609622 ~ 16613663 (-)
XLOC_036355 AL844185.2 non-coding upstream 573958 18584693 ~ 18584807 (-)
XLOC_036356 NA non-coding upstream 583332 18594067 ~ 18599356 (-)
XLOC_036359 NA non-coding upstream 760872 18771607 ~ 18773009 (-)
XLOC_036374 NA non-coding upstream 1975107 19985842 ~ 19989233 (-)
XLOC_036380 NA non-coding upstream 2396918 20407653 ~ 20413849 (-)

Expression


Co-expression Network