XLOC_036345 (elovl8b)


Basic Information

Item Value
gene id XLOC_036345
gene name elovl8b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 18200333 ~ 18203342 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071028
GCAGTCCAAAGTTTTCTTTCCAAATAGATCTGTGTACTTCTGCATTACAACTGATAACACACAATTTTCCGTGTTACTCAAACAAAATTGTTCAAAGTTCCCATCTGACCGTGCGATTGATTAGAACAGCCACACAGTGCGGTATCGATCGTTTAGACTCCTCCACAGTTCTCAATGGAATCCGCATGGCAGAGACTGGAATCCATGCACAAGTGGATTGTAGAGAATGGGgACAAGCGGACTGACCCATGGCTACTAGTCTACTCTCCTGTACCGATCAtctgtatatttttatgttatcTGGGTGTTATTTGGATCGGACCCAAGCTTATGAAAAACATGGAACCAGTGAACCTAAAAGGACTGCTTATTGTGTACAACTTTTCCATGGTTGGTTTGTCTGTATACATGTTCCATGagTTCCTTGTCACATCTTGGCTGGCAAACTACAGCTACCTATGTCAGCCTGTAGACTACAGCACCAGTCCATTGGGAATGAGGATGGCCAATGTGTGCTGGTGGTTTTTCTTCTCTAAAGTAATTGAGCTTAGTGATACAGTCTTTTTCATCCTAAGAAAAAAGAATAGCCAGCTCACATTTCTTCATGTGTATCATCATGGAACAATGATCTTCAATTGGTGGGCAGGAGTTAAATATGTGGCAGGAGGGCAATCATTTTTTATAGGGCTGCTGAACACTTTTGTTCATATTTGGATGTATTCTTACTATGGTCTGGCAGCTCTGGGCCCTCATCTGCAGAAATATCTGTGGTGGAAGCGCTATCTCACCTCACTGCAGCTGGTCCAGTTTATTTTGCTGACTGTTCACACTGGATACAACCTCTTCACTGAGTGTGAATTTCCTGACTCCATGAATGCAGTTGTGTTTGCCTACTGTGTCAGTCTCATCATACTTTTCAGCAACTTTTACTACCAGAGCTACATAAAGAGGAAGAGCAAGAAGTCTTAACAGCATTTGAGCCACACGCTGGGGAGAGGAATAGACAAATGCTGCATCCCCTTACACATTCCATTACTGCATTCTTGGTGTTCTTTAGTGTTCAGGGTTAAAAGGATTTGTTAAACCGCTGACCTCATATCAGATATAGTATGTAAAGGTAATTTTTCAGGGATATATGCTACTTATGCTTTTTGCATTTGGAGAGAGGTGAAATGTCCAGCTTACATTATCAAAACCAAAATAACTTGAATGTAAATAAAGTGTAATGTCATTTTAAGTCACT
>TCONS_00071029
GCATCTGAGTTGAAATGAAAACGGGTGCAGTCCAAAGTTTTCTTTCCAAATAGATCTGTGTACTTCTGCATTACAACTGATAACACACAATTTTCCGTGTTACTCAAACAAAATTGTTCAAAGTTCCCATCTGACCGTGCGATTGATTAGAACAGCCACACAGTGCGGTATCGATCGTTTAGACTCCTCCACAGAGTTCTCAATGGAATCCGCATGGCAGAGACTGGAATCCATGCACAAGTGGATTGTAGAGAATGGGgACAAGCGGACTGACCCATGGCTACTAGTCTACTCTCCTGTACCGATCAtctgtatatttttatgttatcTGGGTGTTATTTGGATCGGACCCAAGCTTATGAAAAACATGGAACCAGTGAACCTAAAAGGACTGCTTATTGTGTACAACTTTTCCATGGTTGGTTTGTCTGTATACATGTTCCATGagTTCCTTGTCACATCTTGGCTGGCAAACTACAGCTACCTATGTCAGCCTGTAGACTACAGCACCAGTCCATTGGGAATGAGGATGGCCAATGTGTGCTGGTGGTTTTTCTTCTCTAAAGTAATTGAGCTTAGTGATACAGTCTTTTTCATCCTAAGAAAAAAGAATAGCCAGCTCACATTTCTTCATGTGTATCATCATGGAACAATGATCTTCAATTGGTGGGCAGGAGTTAAATATGTGGCAGGAGGGCAATCATTTTTTATAGGGCTGCTGAACACTTTTGTTCATATTTGGATGTATTCTTACTATGGTCTGGCAGCTCTGGGCCCTCATCTGCAGAAATATCTGTGGTGGAAGCGCTATCTCACCTCACTGCAGCTGGTCCAGTTTATTTTGCTGACTGTTCACACTGGATACAACCTCTTCACTGAGTGTGAATTTCCTGACTCCATGAATGCAGTTGTGTTTGCCTACTGTGTCAGTCTCATCATACTTTTCAGCAACTTTTACTACCAGAGCTACATAAAGAGGAAGAGCAAGAAGTCTTAACAGCATTTGAGCCACACGCTGGGGAGAGGAATAGACAAATGCTGCATCCCCTTACACATTCCATTACTGCATTCTTGGTGTTCTTTAGTGTTCAGGGTTAAAAGGATTTGTTAAACCGCTGACCTCATATCAGATATAGTATGTAAAGGTAATTTTTCAGGGATATATGCTACTTATGCTTTTTGCATTTGGAGAGAGGTGAAATGTCCAGCTTACATTATCAAAACCAAAATAACTTGAATGTAAATAAAGTGTAATGTCATTTTAAGTC
>TCONS_00071030
GACTTTTAACTGCGCATCTGAGTTGAAATGAAAACGGGTGCAGTCCAAAGTTTTCTTTCCAAATAGATCTGTGTACTTCTGCATTACAACTGATAACACACAATTTTCCGTGTTACTCAAACAAAATTGTTCAAAGTTCCCATCTGACCGTGCGATTGATTAGAACAGCCACACAGTGCGGTATCGATCGTTTAGACTCCTCCACAGTTCTGTAGTAGAGTTCTCAATGGAATCCGCATGGCAGAGACTGGAATCCATGCACAAGTGGATTGTAGAGAATGGGgACAAGCGGACTGACCCATGGCTACTAGTCTACTCTCCTGTACCGATCAtctgtatatttttatgttatcTGGGTGTTATTTGGATCGGACCCAAGCTTATGAAAAACATGGAACCAGTGAACCTAAAAGGACTGCTTATTGTGTACAACTTTTCCATGGTTGGTTTGTCTGTATACATGTTCCATGagTTCCTTGTCACATCTTGGCTGGCAAACTACAGCTACCTATGTCAGCCTGTAGACTACAGCACCAGTCCATTGGGAATGAGGATGGCCAATGTGTGCTGGTGGTTTTTCTTCTCTAAAGTAATTGAGCTTAGTGATACAGTCTTTTTCATCCTAAGAAAAAAGAATAGCCAGCTCACATTTCTTCATGTGTATCATCATGGAACAATGATCTTCAATTGGTGGGCAGGAGTTAAATATGTGGCAGGAGGGCAATCATTTTTTATAGGGCTGCTGAACACTTTTGTTCATATTTGGATGTATTCTTACTATGGTCTGGCAGCTCTGGGCCCTCATCTGCAGAAATATCTGTGGTGGAAGCGCTATCTCACCTCACTGCAGCTGGTCCAGTTTATTTTGCTGACTGTTCACACTGGATACAACCTCTTCACTGAGTGTGAATTTCCTGACTCCATGAATGCAGTTGTGTTTGCCTACTGTGTCAGTCTCATCATACTTTTCAGCAACTTTTACTACCAGAGCTACATAAAGAGGAAGAGCAAGAAGTCTTAACAGCATTTGAGCCACACGCTGGGGAGAGGAATAGACAAATGCTGCATCCCCTTACACATTCCATTACTGCATTCTTGGTGTTCTTTAGTGTTCAGGGTTAAAAGGATTTGTTAAACCGCTGACCTCATATCAGATATAGTATGTAAAGGTAATTTTTCAGGGATATATGCTACTTATGCTTTTTGCATTTGGAGAGAGGTGAAATGTCCAGCTTACATTATCAAAACCAAAATAACTTGAATGTAAATAAAGTGTAATGTCATTTTAA
>TCONS_00071031
CGATTGATTAGAACAGCCACACAGTGCGGTATCGATCGTTTAGACTCCTCCACAGTTCTGTAGTAGAGTTCTCAATGGAATCCGCATGGCAGAGACTGGAATCCATGCACAAGTGGATTGTAGAGAATGGGgACAAGCGGACTGACCCATGGCTACTAGTCTACTCTCCTGTACCGATCAtctgtatatttttatgttatcTGGGTGTTATTTGGATCGGACCCAAGCTTATGAAAAACATGGAACCAGTGAACCTAAAAGGACTGCTTATTGTGTACAACTTTTCCATGGTTGGTTTGTCTGTATACATGTTCCATGaggtaaataatgcattttatacatTACTCCATTAGTTCAGGTTGGTTATCCTACCATCAAGGTCTTGCTTTCAATAATCAAGTCATTCAGTCTGAGAATATTGAAGATGCGTGTCCTCATCATGACCTTTTACCAACAAAGTATCGTTTCTTTCCACAGTTCCTTGTCACATCTTGGCTGGCAAACTACAGCTACCTATGTCAGCCTGTAGACTACAGCACCAGTCCATTGGGAATGAGGATGGCCAATGTGTGCTGGTGGTTTTTCTTCTCTAAAGTAATTGAGCTTAGTGATACAGTCTTTTTCATCCTAAGAAAAAAGAATAGCCAGCTCACATTTCTTCATGTGTATCATCATGGAACAATGATCTTCAATTGGTGGGCAGGAGTTAAATATGTGGCAGGAGGGCAATCATTTTTTATAGGGCTGCTGAACACTTTTGTTCATATTTGGATGTATTCTTACTATGGTCTGGCAGCTCTGGGCCCTCATCTGCAGAAATATCTGTGGTGGAAGCGCTATCTCACCTCACTGCAGCTGGTCCAGTTTATTTTGCTGACTGTT
>TCONS_00071032
AACATGGATTCATCCAtatacaactacaacaacaaaatTCACGCACAGTGTACACCGCAtcaataattagcatgtttttatcaGAATTGACTGCATTTCCATCGTGTTTTTTCGTGTTGTGTAATTGTGGTCTTGCCTGTGTCTTTAATAATGAAGTTCTGTAGTAGAGTTCTCAATGGAATCCGCATGGCAGAGACTGGAATCCATGCACAAGTGGATTGTAGAGAATGGGgACAAGCGGACTGACCCATGGCTACTAGTCTACTCTCCTGTACCGATCAtctgtatatttttatgttatcTGGGTGTTATTTGGATCGGACCCAAGCTTATGAAAAACATGGAACCAGTGAACCTAAAAGGACTGCTTATTGTGTACAACTTTTCCATGGTTGGTTTGTCTGTATACATGTTCCATGagTTCCTTGTCACATCTTGGCTGGCAAACTACAGCTACCTATGTCAGCCTGTAGACTACAGCACCAGTCCATTGGGAATGAGGATGGCCAATGTGTGCTGGTGGTTTTTCTTCTCTAAAGTAATTGAGCTTAGTGATACAGTCTTTTTCATCCTAAGAAAAAAGAATAGCCAGCTCACATTTCTTCATGTGTATCATCATGGAACAATGATCTTCAATTGGTGGGCAGGAGTTAAATATGTGGCAGGAGGGCAATCATTTTTTATAGGGCTGCTGAACACTTTTGTTCATATTTGGATGTATTCTTACTATGG
>TCONS_00071033
CTGTGTACTTCTGCATTACAACTGATAACACACAATTTTCCGTGTTACTCAAACAAAATTGTTCAAAGTTCCCATCTGACCGTGCGATTGATTAGAACAGCCACACAGTGCGGTATCGATCGTTTAGACTCCTCCACAGAGTTCTCAATGGAATCCGCATGGCAGAGACTGGAATCCATGCACAAGTGGATTGTAGAGAATGGGgACAAGCGGACTGACCCATGGCTACTAGTCTACTCTCCTGTACCGATCAtctgtatatttttatgttatcTGGGTGTTATTTGGATCGGACCCAAGCTTATGAAAAACATGGAACCAGTGAACCTAAAAGGACTGCTTATTGTGTACAACTTTTCCATGGTTGGTTTGTCTGTATACATGTTCCATGagTTCCTTGTCACATCTTGGCTGGCAAACTACAGCTACCTATGTCAGCCTGTAGACTACAGCACCAGTCCATTGGGAATGAGGATG

Function

symbol description
elovl8b Predicted to enable fatty acid elongase activity. Predicted to be involved in fatty acid biosynthetic process and sphingolipid biosynthetic process. Predicted to act upstream of or within fatty acid biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of endoplasmic reticulum membrane.

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0006631 fatty acid metabolic process biological_process
GO:0006633 fatty acid biosynthetic process biological_process
GO:0030148 sphingolipid biosynthetic process biological_process
GO:0042761 very long-chain fatty acid biosynthetic process biological_process
GO:0019367 fatty acid elongation, saturated fatty acid biological_process
GO:0034625 fatty acid elongation, monounsaturated fatty acid biological_process
GO:0034626 fatty acid elongation, polyunsaturated fatty acid biological_process
GO:0030176 integral component of endoplasmic reticulum membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0102756 very-long-chain 3-ketoacyl-CoA synthase activity molecular_function
GO:0016740 transferase activity molecular_function
GO:0009922 fatty acid elongase activity molecular_function
GO:0102336 3-oxo-arachidoyl-CoA synthase activity molecular_function
GO:0102337 3-oxo-cerotoyl-CoA synthase activity molecular_function
GO:0102338 3-oxo-lignoceronyl-CoA synthase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050522-453 Predicted to enable fatty acid elongase activity. Predicted to be involved in fatty acid biosynthetic process and sphingolipid biosynthetic process. Predicted to act upstream of or within fatty acid biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of endoplasmic reticulum membrane.

Ensembl:

ensembl_id ENSDARG00000057365

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071028 False 1243 mRNA 0.41 8 18200333 18203303
TCONS_00071029 False 1268 mRNA 0.41 8 18200336 18203329
TCONS_00071030 False 1289 mRNA 0.41 8 18200339 18203342
TCONS_00071031 False 882 lncRNA 0.42 7 18200751 18203190
TCONS_00071032 False 732 mRNA 0.40 6 18201023 18203092
TCONS_00071033 True 477 mRNA 0.44 5 18202146 18203274

Neighbor

gene id symbol gene type direction distance location
XLOC_036344 rps8b coding downstream 330 18193116 ~ 18200003 (-)
XLOC_036343 dio1 coding downstream 158244 18039570 ~ 18042089 (-)
XLOC_036342 acot11b coding downstream 189598 17993788 ~ 18010735 (-)
XLOC_036341 fpgt coding downstream 212784 17983369 ~ 17987549 (-)
XLOC_036340 tnni3k coding downstream 220016 17958419 ~ 17980317 (-)
XLOC_036346 CT025742.1 coding upstream 775 18204117 ~ 18211605 (-)
XLOC_036347 armh1 coding upstream 10739 18214081 ~ 18229209 (-)
XLOC_036348 guk1b coding upstream 27606 18230948 ~ 18239498 (-)
XLOC_036349 rnf220b coding upstream 39163 18242505 ~ 18316482 (-)
XLOC_036350 dmap1 coding upstream 151143 18354485 ~ 18367736 (-)
XLOC_036336 NA non-coding downstream 415422 17777860 ~ 17784911 (-)
XLOC_036335 NA non-coding downstream 539139 17659597 ~ 17661194 (-)
XLOC_036332 BX465215.1 non-coding downstream 947979 17252239 ~ 17252354 (-)
XLOC_036322 NA non-coding downstream 1586670 16609622 ~ 16613663 (-)
XLOC_036355 AL844185.2 non-coding upstream 381351 18584693 ~ 18584807 (-)
XLOC_036356 NA non-coding upstream 390725 18594067 ~ 18599356 (-)
XLOC_036359 NA non-coding upstream 568265 18771607 ~ 18773009 (-)
XLOC_036374 NA non-coding upstream 1782500 19985842 ~ 19989233 (-)
XLOC_036380 NA non-coding upstream 2204311 20407653 ~ 20413849 (-)

Expression


Co-expression Network