| Item | Value |
|---|---|
| gene id | XLOC_000364 |
| gene name | bora |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 30723380 ~ 30735478 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| bora | Predicted to enable protein kinase binding activity. Predicted to be involved in activation of protein kinase activity; regulation of cell cycle process; and regulation of protein localization. Predicted to act upstream of or within cell division. Predicted to be active in cytoplasm and nucleus. Is expressed in alar plate midbrain region; nervous system; optic vesicle; pharyngeal arch; and yolk syncytial layer. Orthologous to human BORA (BORA aurora kinase A activator). |
| id | name | namespace |
|---|---|---|
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | biological_process |
| GO:0019222 | regulation of metabolic process | biological_process |
| GO:0080090 | regulation of primary metabolic process | biological_process |
| GO:0032880 | regulation of protein localization | biological_process |
| GO:0051171 | regulation of nitrogen compound metabolic process | biological_process |
| GO:0090304 | nucleic acid metabolic process | biological_process |
| GO:0009059 | macromolecule biosynthetic process | biological_process |
| GO:1901576 | organic substance biosynthetic process | biological_process |
| GO:0009889 | regulation of biosynthetic process | biological_process |
| GO:0031323 | regulation of cellular metabolic process | biological_process |
| GO:0031326 | regulation of cellular biosynthetic process | biological_process |
| GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
| GO:0032147 | activation of protein kinase activity | biological_process |
| GO:0044237 | cellular metabolic process | biological_process |
| GO:0010468 | regulation of gene expression | biological_process |
| GO:0007049 | cell cycle | biological_process |
| GO:0044249 | cellular biosynthetic process | biological_process |
| GO:0044260 | cellular macromolecule metabolic process | biological_process |
| GO:0044271 | cellular nitrogen compound biosynthetic process | biological_process |
| GO:0060236 | regulation of mitotic spindle organization | biological_process |
| GO:0051301 | cell division | biological_process |
| GO:0007088 | regulation of mitotic nuclear division | biological_process |
| GO:0060255 | regulation of macromolecule metabolic process | biological_process |
| GO:0043170 | macromolecule metabolic process | biological_process |
| GO:0006807 | nitrogen compound metabolic process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0010556 | regulation of macromolecule biosynthetic process | biological_process |
| GO:0034645 | cellular macromolecule biosynthetic process | biological_process |
| GO:2000112 | regulation of cellular macromolecule biosynthetic process | biological_process |
| GO:0072687 | meiotic spindle | cellular_component |
| GO:0044424 | obsolete intracellular part | cellular_component |
| GO:0044428 | obsolete nuclear part | cellular_component |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0043226 | organelle | cellular_component |
| GO:0043227 | membrane-bounded organelle | cellular_component |
| GO:0043229 | intracellular organelle | cellular_component |
| GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0019901 | protein kinase binding | molecular_function |
| GO:0043169 | cation binding | molecular_function |
| id | description |
|---|---|
| ko03036 | Chromosome and associated proteins |
| id | description |
|---|---|
| ZDB-GENE-041114-165 | Predicted to enable protein kinase binding activity. Predicted to be involved in activation of protein kinase activity; regulation of cell cycle process; and regulation of protein localization. Predicted to act upstream of or within cell division. Predicted to be active in cytoplasm and nucleus. Is expressed in alar plate midbrain region; nervous system; optic vesicle; pharyngeal arch; and yolk syncytial layer. Orthologous to human BORA (BORA aurora kinase A activator). |
| ensembl_id | ENSDARG00000042688 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00000621 | False | 744 | lncRNA | 0.42 | 7 | 30723380 | 30727619 |
| TCONS_00000622 | False | 918 | mRNA | 0.47 | 9 | 30723380 | 30728007 |
| TCONS_00000623 | False | 2483 | mRNA | 0.43 | 12 | 30723458 | 30734796 |
| TCONS_00000624 | False | 2019 | mRNA | 0.46 | 12 | 30723461 | 30734363 |
| TCONS_00000625 | True | 3053 | mRNA | 0.43 | 11 | 30723677 | 30735478 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_000363 | gpr183b | coding | upstream | 168407 | 30551777 ~ 30554973 (+) |
| XLOC_000362 | tmem41ab | coding | upstream | 285344 | 30422143 ~ 30438036 (+) |
| XLOC_000359 | vps8 | coding | upstream | 412691 | 30083578 ~ 30310689 (+) |
| XLOC_000361 | BX255890.2 | coding | upstream | 495875 | 30227391 ~ 30227505 (+) |
| XLOC_000360 | dre-mir-740 | coding | upstream | 557315 | 30165953 ~ 30166065 (+) |
| XLOC_000365 | BX548015.2 | coding | downstream | 118491 | 30853969 ~ 30859524 (+) |
| XLOC_000366 | metap1d | coding | downstream | 210753 | 30946231 ~ 30974165 (+) |
| XLOC_000367 | itga6b | coding | downstream | 283687 | 31019165 ~ 31064706 (+) |
| XLOC_000368 | eef1a1l2 | coding | downstream | 375339 | 31110817 ~ 31130222 (+) |
| XLOC_000369 | NA | coding | downstream | 405641 | 31141119 ~ 31144527 (+) |
| XLOC_000358 | NA | non-coding | upstream | 643851 | 30074635 ~ 30079529 (+) |
| XLOC_000350 | CR774189.1 | non-coding | upstream | 1214907 | 29507647 ~ 29508473 (+) |
| XLOC_000349 | NA | non-coding | upstream | 1222346 | 29500308 ~ 29501034 (+) |
| XLOC_000370 | NA | non-coding | downstream | 619107 | 31354585 ~ 31359319 (+) |
| XLOC_000371 | CT573247.1 | non-coding | downstream | 783761 | 31519239 ~ 31520972 (+) |
| XLOC_000380 | NA | non-coding | downstream | 1274784 | 32010262 ~ 32011794 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000049_01420749_01429016 | BORA | coding | CI01000049 | null | 1420749 ~ 1429370 (+) |