XLOC_036487 (tmem51a)


Basic Information

Item Value
gene id XLOC_036487
gene name tmem51a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 26701038 ~ 26709959 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071294
GAAGATGTTCGTGTTTGTGGAACTCAAGGCCAACCCGCTTTAAGAAGTTCAGCTTCACTTTCTTAAGGAATGTAGCAAATACTTCGCTGTACGTGTACATCTTTGGATTAAAAGAAGTGTCGTTGGACTAGGACAACGCAAGGAAGGGAAGTTTTCTCGAATGGGTCAGTGCTCCAGGAAAAGCAGAAACGAACAATGAAATAAGCCAAAGTTTTAGACATTACAGCAGCCATAGGACAAAATAAAATCAGTGTCTGGTGGAGATTGGAGTCCATGGTAAGGTTTGGAAACATGTCCTACAGCGACCAGACCCCACCCAACCCCAGGAGGCCCAACGGCAGCAACTCTGGGGCTCAGTATGCGACCGCTGCTTTAGGAGTAGGGCTCATCGCACTAGGGATCGTTATGATTGTGTGGAGCGTGGTGCCGGCAGCTTCTGGAGGGAACAGCTCGAAGCCGGGCATGAACTCTGGACAAGTTCGGGAGACCTCGTCCGTGGCTTTCGTCCTGGTGGGGGGAGGAGTGGCGCTGctgttgctgtctgtgtgtttAAGTGTACGGAACAAACAGCGGGCGGCCAGGGGACAGGAAGCCGGCAGTACACCCTCCAACACACAGGAGGAGGGGGCGACGATGGATCAACTAGCTCATAGCTACACAGTCCCCACTTACGAGGAGGTGGTTACAAGTGGTCAGTATCCCATCAGTCAGACCTCTGAGCGCCACAACAGCATCACTCAGCTGCCAGCCTACGAAGAGCTTGAAGAAGGCCAAAACAACTTAGGAGATACCTCCAGTCAAGCTCGCAGATCTTCATCCCAAATCGATCCCAGCACTGGAGCAGGACCCCGCAGAAACAGCCGTCCTGGTCGCAAACTAATTCCACTCAAAATTAGGCGCATTAAATCCGACAACCTAAGAAGAAAAAGCTTAAGTGATATACAACAGAGCAACGTGTTCACTATTGAACCTCTCACACCTCCACCAGAGTACGACAATAAGCCTCCTCAGTTTCCTCCAAACACTGAACAATGACCAATATTGGCATGTCCCGTGATGAAGTTTGTTTTCACATTTATGAAATGCTAAAGCACTGAATTGTATTCTTCTCTGGACATGTGTTCTGCGCCACAGGAATACAGAAGAAGCAGTGTTTGGTTGGTTGTACATTTTGTGTTTGTTAGCCAAATGCTAaagctaaaaacaaaacacttaatAAAATGTTGTCTGTAGCTGATTGGACTAAAAGCGTACTGGATATTCGAGCATTGTTTACTGAAGAACTTGGTCTTGCAGTTGCCGTTAAACTTGAACTTCTCCATCCAGACTTTTATTTCATAGGACGTCCGCGAGATTTTGGGAAATGATGTGAAAGTGTAAGCTGTGATTCACATCGGCACTGTTGCGTTTTTTGCactgatgcgtgtgtgtgtttgtcaggtgTGAGTgctatttttgtacatttttttccttgaatttgtattttgtgttggctttaggtttctgtgtttgtgtgcaagTATGATTGTTCTTGGTGACCTTGTTGCTGGAGTGACAAACTGTGAGGTCATCAGTATGTGTCTGCTCATGGTTTACGACACAGAGAGGTTCTTTGACCCTGCAGCTGCCTTATATCACTCTCTCTCACCAACACACACCACCAGATACAGAGAATTTCTTGTCTTCCATTTTCACTTGGATGCACAAAACACTTgctcttttcattcttttattttgtaacttTTTAGTTGATTTGTGAGAAGACAACTGTGTTTCTTGTAGGGCAGCTGTGGCTTCTTCATGCTGTAGGGTTCAAGCTAGCTGTCATCTGTGTGCACCTGCGTTACTCCTCTACACACTTCAGGATTGTCACATTAAGACACAGTCCGTTGCTGATTaatattgaagttgatatctctctttttttctggAATTTTTGATGACACTGCAGTTTAATGTAAAATGTTGCTGAATTTCATGTGCTATTTAATGTTTCTATTGttgattttgtaatattatattatggtttgacaaataaaaaaatgttttgcata
>TCONS_00071295
ATGGCGGTTACTCAGAACGTGAGGGATTATCAGAAACAGCCCACCATCTTCCAGAACAAAAAAGGGGTTCTGGCAGTTGAAGGAAGTGGCAAAGAAAAGCTCCCTCGTTATCACAGAAACGTCGGATTGGGCTTCAAAAACCCCAGAGAAGCTATTGATGGCACTTATATTGACAAGAAATGCCCCTTCACTGGAAACGTGTCCATCAGAGGCTGGATTCTCTCCGGTGTGGTGACCAAGATGAAGATGCAAAGGACCATCGTCATCAGACGGGACAACTTGCATTACATCCGCAAGTACAACCGTTTTGAGAAGAGACATAAGAACATGTCTGTCCACCTCTCCCCATGCTTCAGGGATGTGACTGTAGGTGACATCGTTACGGTTGGAGAATGGCAAACTCTTAGCAAGACCGTGAGGTTCAACGTCCTGAAGGTCACCAAGGCAGAAGCAGTTCCAGAATTTGTTTTCACATTTATGAAATGCTAA
>TCONS_00071296
CTGAGCAGGAGGGACTCCTGCTTAATCTCGGGAGGGAAGTTAGGCCAGTCTAACATGTTCACCGATATGTGTAGacaataaataatgtttgatAAAACCTTATCACTCCTGAAGCTTAGGCCGCTATTGCGCTATGCTATTTTAACACAGGCTTTATGGGGCATGTTGACGTTTATTGATATAAAACTCTCTTTTATGATAGTCTGTCTCATTCATCCATCACTTTTTTGATTAACCGCCTGATTTTCTGTTCACAGAATGGGTCAGTGCTCCAGGAAAAGCAGAAACGAACAATGAAATAAGCCAAAGTTTTAGACATTACAGCAGCCATAGGACAAAATAAAATCAGTGTCTGGTGGAGATTGGAGTCCATGGTAAGGTTTGGAAACATGTCCTACAGCGACCAGACCCCACCCAACCCCAGGAGGCCCAACGGCAGCAACTCTGGGGCTCAGTATGCGACCGCTGCTTTAGGAGTAGGGCTCATCGCACTAGGGATCGTTATGATTGTGTGGAGCGTGGTGCCGGCAGCTTCTGGAGGGAACAGCTCGAAGCCGGGCATGAACTCTGGACAAGTTCGGGAGACCTCGTCCGTGGCTTTCGTCCTGGTGGGGGGAGGAGTGGCGCTGctgttgctgtctgtgtgtttAAGTGTACGGAACAAACAGCGGGCGGCCAGGGGACAGGAAGCCGGCAGTACACCCTCCAACACACAGGAGGAGGGGGCGACGATGGATCAACTAGCTCATAGCTACACAGTCCCCACTTACGAGGAGGTGGTTACAAGTGGTCAGTATCCCATCAGTCAGACCTCTGAGCGCCACAACAGCATCACTCAGCTGCCAGCCTACGAAGAGCTTGAAGAAGGCCAAAACAACTTAGGAGATACCTCCAGTCAAGCTCGCAGATCTTCATCCCAAATCGATCCCAGCACTGGAGCAGGACCCCGCAGAAACAGCCGTCCTGGTCGCAA
>TCONS_00071297
cttaacaagcggatagctcTTTACGACTTGGCTGGCAAAGATGGCGGTTACTCAGAACGTGAGGGATTATCAGAAACAGCCCACCATCTTCCAGAACAAAAAAGGGGTTCTGGCAGTTGAAGGAAGTGGCAAAGAAAAGCTCCCTCGTTATCACAGAAACGTCGGATTGGGCTTCAAAAACCCCAGAGAAGCTATTGATGGCACTTATATTGACAAGAAATGCCCCTTCACTGGAAACGTGTCCATCAGAGGCTGGATTCTCTCCGGTGTGGTGACCAAGATGAAGATGCAAAGGACCATCGTCATCAGACGGGACAACTTGCATTACATCCGCAAGTACAACCGTTTTGAGAAGAGACATAAGAACATGTCTGTCCACCTCTCCCCATGCTTCAGGGATGTGACTGTAGGTGACATCGTTACGGTTGGAGAATGGCAAACTCTTAGCAAGACCGTGAGGTTCAACGTCCTGAAGGTCACCAAGGCAGAAGCAGTTCCAGAAGTGCTAGAACTGTTGTTTTTACAATATGGCTCCCCTgtgttgttgaaaaaaaaaa

Function

symbol description
tmem51a Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM51 (transmembrane protein 51).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061103-481 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM51 (transmembrane protein 51).

Ensembl:

ensembl_id ENSDARG00000068575 ENSDARG00000093606

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071294 False 2054 mRNA 0.44 3 26701038 26709959
TCONS_00071295 False 489 mRNA 0.47 2 26702003 26703195
TCONS_00071296 False 973 nonsense_mediated_decay 0.51 2 26702217 26707359
TCONS_00071297 True 557 mRNA 0.47 1 26702679 26703235

Neighbor

gene id symbol gene type direction distance location
XLOC_036486 NA coding downstream 703 26685829 ~ 26700335 (-)
XLOC_036485 sema3b coding downstream 91779 26586484 ~ 26609259 (-)
XLOC_036484 si:dkey-20d21.12 coding downstream 312948 26382604 ~ 26388090 (-)
XLOC_036483 NA coding downstream 332672 26329253 ~ 26368366 (-)
XLOC_036481 NA coding downstream 374537 26119223 ~ 26326501 (-)
XLOC_036488 kazna coding upstream 4573 26714532 ~ 26792912 (-)
XLOC_036489 zmynd12 coding upstream 192399 26902358 ~ 26918516 (-)
XLOC_036490 slc16a1b coding upstream 213654 26923613 ~ 26961779 (-)
XLOC_036491 NA coding upstream 257477 26967436 ~ 26971126 (-)
XLOC_036492 CR847799.1 coding upstream 267470 26977429 ~ 26979079 (-)
XLOC_036482 NA non-coding downstream 471242 26215684 ~ 26229796 (-)
XLOC_036474 BX544876.1 non-coding downstream 966103 25731012 ~ 25734935 (-)
XLOC_036493 NA non-coding upstream 461749 27171708 ~ 27222033 (-)
XLOC_036494 CR376741.3 non-coding upstream 473315 27183274 ~ 27201164 (-)
XLOC_036495 CR376741.1 non-coding upstream 493367 27203326 ~ 27206934 (-)

Expression


Co-expression Network