| Item | Value |
|---|---|
| gene id | XLOC_036494 |
| gene name | CR376741.3 |
| gene type | non-coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007119.7 |
| NCBI id | CM002892.2 |
| chromosome length | 54304671 |
| location | 27183274 ~ 27201164 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | biological_process |
| GO:0016070 | RNA metabolic process | biological_process |
| GO:0080090 | regulation of primary metabolic process | biological_process |
| GO:0051171 | regulation of nitrogen compound metabolic process | biological_process |
| GO:0090304 | nucleic acid metabolic process | biological_process |
| GO:0009889 | regulation of biosynthetic process | biological_process |
| GO:0031326 | regulation of cellular biosynthetic process | biological_process |
| GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
| GO:0006725 | cellular aromatic compound metabolic process | biological_process |
| GO:1901360 | organic cyclic compound metabolic process | biological_process |
| GO:0010467 | gene expression | biological_process |
| GO:0044238 | primary metabolic process | biological_process |
| GO:0044260 | cellular macromolecule metabolic process | biological_process |
| GO:0043170 | macromolecule metabolic process | biological_process |
| GO:0006807 | nitrogen compound metabolic process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0010556 | regulation of macromolecule biosynthetic process | biological_process |
| GO:2000112 | regulation of cellular macromolecule biosynthetic process | biological_process |
| GO:0046483 | heterocycle metabolic process | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| GO:0003677 | DNA binding | molecular_function |
| GO:0003690 | double-stranded DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0000976 | transcription regulatory region sequence-specific DNA binding | molecular_function |
| GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding | molecular_function |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | molecular_function |
| GO:0140110 | transcription regulator activity | molecular_function |
| GO:0001067 | regulatory region nucleic acid binding | molecular_function |
| GO:1990837 | sequence-specific double-stranded DNA binding | molecular_function |
| ensembl_id | ENSDARG00000117265 ENSDARG00000117347 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00071304 | False | 698 | lncRNA | 0.31 | 3 | 27183274 | 27186403 |
| TCONS_00071305 | False | 1239 | lncRNA | 0.37 | 5 | 27183274 | 27201164 |
| TCONS_00072471 | False | 3093 | lncRNA | 0.31 | 1 | 27183286 | 27186378 |
| TCONS_00072046 | False | 813 | lncRNA | 0.34 | 4 | 27183286 | 27186386 |
| TCONS_00072047 | False | 1544 | lncRNA | 0.35 | 4 | 27183332 | 27201164 |
| TCONS_00072048 | False | 556 | lncRNA | 0.38 | 3 | 27183594 | 27185580 |
| TCONS_00072049 | False | 310 | lncRNA | 0.34 | 2 | 27186037 | 27186444 |
| TCONS_00071306 | False | 761 | lncRNA | 0.38 | 3 | 27197082 | 27198010 |
| TCONS_00071307 | False | 983 | lncRNA | 0.40 | 5 | 27197082 | 27199090 |
| TCONS_00072051 | False | 1443 | lncRNA | 0.37 | 3 | 27197084 | 27199843 |
| TCONS_00072050 | False | 1263 | lncRNA | 0.38 | 5 | 27197084 | 27199843 |
| TCONS_00072052 | False | 972 | lncRNA | 0.41 | 7 | 27197103 | 27199674 |
| TCONS_00072472 | False | 1046 | lncRNA | 0.42 | 7 | 27197103 | 27200394 |
| TCONS_00072057 | False | 1348 | lncRNA | 0.35 | 5 | 27197509 | 27200334 |
| TCONS_00072061 | False | 2185 | lncRNA | 0.36 | 2 | 27197509 | 27200368 |
| TCONS_00072056 | False | 836 | lncRNA | 0.43 | 6 | 27197509 | 27200368 |
| TCONS_00072473 | False | 2864 | lncRNA | 0.33 | 1 | 27197509 | 27200372 |
| TCONS_00072059 | False | 869 | lncRNA | 0.42 | 5 | 27197509 | 27200392 |
| TCONS_00072053 | False | 678 | lncRNA | 0.45 | 6 | 27197509 | 27200421 |
| TCONS_00072054 | False | 851 | lncRNA | 0.45 | 8 | 27197509 | 27200831 |
| TCONS_00072060 | False | 1136 | lncRNA | 0.42 | 5 | 27197509 | 27201100 |
| TCONS_00072055 | False | 1443 | lncRNA | 0.40 | 6 | 27197509 | 27201104 |
| TCONS_00072058 | True | 678 | lncRNA | 0.43 | 5 | 27197769 | 27200375 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_036492 | CR847799.1 | coding | downstream | 204195 | 26977429 ~ 26979079 (-) |
| XLOC_036491 | NA | coding | downstream | 212148 | 26967436 ~ 26971126 (-) |
| XLOC_036490 | slc16a1b | coding | downstream | 221495 | 26923613 ~ 26961779 (-) |
| XLOC_036489 | zmynd12 | coding | downstream | 264758 | 26902358 ~ 26918516 (-) |
| XLOC_036488 | kazna | coding | downstream | 390362 | 26714532 ~ 26792912 (-) |
| XLOC_036495 | CR376741.1 | coding | upstream | 2162 | 27203326 ~ 27206934 (-) |
| XLOC_036496 | TAFA3 | coding | upstream | 160523 | 27361687 ~ 27515540 (-) |
| XLOC_036497 | NA | coding | upstream | 350060 | 27551224 ~ 27574083 (-) |
| XLOC_036498 | AL954868.1 | coding | upstream | 395271 | 27596435 ~ 27606953 (-) |
| XLOC_036499 | mov10b.2 | coding | upstream | 429528 | 27630692 ~ 27656765 (-) |
| XLOC_036486 | NA | non-coding | downstream | 482939 | 26685829 ~ 26700335 (-) |
| XLOC_036483 | NA | non-coding | downstream | 814908 | 26329253 ~ 26368366 (-) |
| XLOC_036482 | NA | non-coding | downstream | 953478 | 26215684 ~ 26229796 (-) |
| XLOC_036501 | BX664731.1 | non-coding | upstream | 526806 | 27727970 ~ 27728086 (-) |
| XLOC_036503 | NA | non-coding | upstream | 967973 | 28169137 ~ 28228356 (-) |