XLOC_036499 (mov10b.2)


Basic Information

Item Value
gene id XLOC_036499
gene name mov10b.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 27630692 ~ 27656765 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071316
CTGCGCTCGATCATATGAGAGCGTGCGGTTATCGTTCAATCCGTTTCTGCGATAGACAGATTCAATAGGAGCTTTCAGACAGTATGAGCAGAAGAAACAGGAATAATTACCTTTCTATAGCCGCTGTGCGGACAATTGGATTGGATTTTATAGAGATGCTGGAGGAAACAAACAGGAGATCCATTTCGGACAGAAATACTCTGACAGATATCTACAACACAGAGTTTCGAGATAGGGACGGTGGAGTTAAAGATCCAAActtctctcgagtcctctatgcGTTGAGAAACGCCAATAAAGCGCGCCTCTCAAGAACAGGTCGTGTTTACTTCAATACTAATGTAAGAACGGGGCTGCACGATCAATGGTTTCGGCCACGTCGAAGACAACAGAACCAAGCTAACGCAACTCCAGGTAATGTTAGCTCAGTGACGCCTTCTAGTGATCAGGGGCCCTCTTGCCCAGAGAGTGGAGTCAGAGCAAGGAGAAAACTGGTAAAATACATCCTACAGCGACTCAACACTACAGACAGGTCTCATTTTATAGCTGATAAGTGGGGTGTGCGGGTGTCCTCTGAGCTCTATATAGAAGATGGAAAGATTCGGATCAGTGTGGATGAAGCAGAAGTTTATGAGTTGAAGCTGTTTGTTGAGAACACTGGTCAGGAAGCTGTATATTTCACATACTACACTGCTCTTTGCTGGCTGCAGTATTTTACTCTGGAAGACAGTCGGAAAGTCACACGCAACAATCCACTCCGTCTGGAGCCACGTGAGAAGTATGAGGTGATTGTGAGATTCAAATCCAGTCATGTTGGAGTTTATTCGGCTACTCTGGCATTTGAGTTTAAGAAGAACACCCAGCCCACCACACGTTCCTTCCACATTGTGCGCTTCATTGAGGCTGAATACAGGAGTAAACTTGCAGCCCTGCTGGGTCCTACAGAGCCATACAAGCCCCTGAGACTCAACATCTCTGAACCCGAAAACTGCATAATAGATGAGGGTTTTCCACCTGATGGTTATCTTCAGAACTTTCTTGTAAATGTTCTGCCCTTGGGGAAATACATTCCTCCTCCTGACACCACTATACTGGCCGAACTCCTGAAAGAGGACTGTTCTTCTCGGATCTTCAGGGGGAAACTTAAGGATCTTCAGTCACTTTTGCAGAGTCCGCTGACCTTCGACAATTATGCAGAACGCTTTGATTTACTGCTGTATCTGGAAGAGTGTCAGATGCACGTGGATATCAAGAGATACAATAAAGACAGTGTCACCTTACATAGGGACCGTGACAAAAGACTGATGGGTTTAAATCTCCCTGGTGTCTCAGAGAACAGGCCTTCAGTCCTGAGAGGAGATCACCTGCTTCTTACTAAAAGCGAGGAGGTCACTTTTTCAAATGTGACCAAATACAAGGGCTACGTCCACAGAGTGGAACTGGATCAGGTCAAACTGGGCCTCTCCAAAAGGTTCCTTAAAGATGTATACATTGATAAGATGAAATTCCGTGTCGAGTTCACAGTCAATCGTATTCCGGTAAGATTACAACACAGAGCGGTTCATATGGCGGTCCAGCACAACCTCAAGGATGTGCTGTTCCCTATGGCCTCAAGAAGTCTGAATCCTGTGTCTCCACCTGCTCTGAGgCTCTTTGATCGAAAGCTTGAGTACAACTTTCAACAGTACAGTGCAGTGTGTAACATTGTGGCCGGTACTTCCAAACCTGCACCGTATCTGGTGTTTGGACCTCCTGGCACTGGTAAAACCGTCACGATAGTGGAGGCTATCAAACAGGTGGAAAAGAATATCCCAGATGCCTATATTCTAGCTTGTGCTCCATCTAACAGCGCCGCTGATCAACTGTGTGAAAAGTTGATCACTAGTGAACATGTTGATGCGCACAAAATATACAGACTCTACGCAAGCTCACGAAATCAAAAAGACATTCCTAAAATCCTAAAGGACAACTGCAATGTGGATGAAGAGATGATTGATTTCCCATGTAAAGAGGATCTAATGTCCTACAAGATCCTCATCTGCACTCTGGTCACTGCAGGCAGGCTGGTCACTGGGGGATTTTCTGAGGATCATTTTACTCACAACTTTGTGGATGAAGCTGGACATGCTGTGGAGTCAGAGACCATCATCAGTGTGGCAGGATTGTTGAATGCAGAGAAGGGACAGCTTGTTTTGGCTGGGGATCCTAAACAGCTGGGGCCAATCCTGAGATCCCCACTTGCCATTAATCATGGACTTGATGTCTCTTTGTTAGAGAGGCTGATGACACAGAATGATCTTTATAAGAGAGGTGACGTGGAATTCGACAACCGCTACGTCAGCAAACTTATTATGAATTACAGGTCTCACCCATACATTTTGGAGGTTCCTAATAGGTTGTTCTATGATGGGGAACTGAAAGCATGTGCCGATGAGATCAGCTCTAATCAATACTGCATGTGGGAGCACTTGCCTTCAAAGGGATTCCCTGTGATTTTCCATGGAGTTCCTGGAAAGGATGAGCGAGAGTCAAACAGTCCTTCTTTCTTTAACATCTATGAAATCAACATCCTTGTTGACTACTTGAAGAAGCTGCTTCTGACACAGCCCAAGAAGGGAATCTCAAGAATCTTCCCCAAAGACATTGGCATCATCGCCCCCTACCGGAAACAGGTGGAGAAGATCAAACGAGCCATCGATGCAGACAAGGACTTCCAAGATTACATGGGCATTGACAACCTGAAAGTCGGTTCTGTGGAGGAGTTTCAGGGCCAAGAGAGGAAAGTGATCATGGTGTCGACTGTTCGCAGCAGTGTAAAATACATCAGTTTGGATGAAACATTCAACATTGGGTTTCTCAAAAATGAAAAGAGATTCAATGTGGCGGTGACAAGGGCAAAATCGTTGTTAATCATGGTGGGAAACCCCATGATTCTGCGGACAGATGAAAGCTGGGGCCGGTTTATTGACTTCTGCTTGGAGCGGGGTGGTTACACTGGGATTTCCATTACCAGCGTTGAGAGAATAGATGATGTTGAAAGTCGTCTTCTTGCTCTTAACATCCAGGACGAGGAAACCGAGGAGAGTCCAGTCCAGCGGTATGTGGATCCCGAGTTTAGGAATGATTACTAA

Function

symbol description
mov10b.2 Predicted to enable RNA binding activity. Predicted to be involved in mRNA cleavage involved in gene silencing by miRNA. Predicted to act upstream of or within gene silencing by RNA. Predicted to be located in P-body. Predicted to be active in P granule and cytosol. Human ortholog(s) of this gene implicated in hypertension. Orthologous to human MOV10 (Mov10 RISC complex RNA helicase).

GO:

id name namespace
GO:0035279 mRNA cleavage involved in gene silencing by miRNA biological_process
GO:0031047 gene silencing by RNA biological_process
GO:0035194 post-transcriptional gene silencing by RNA biological_process
GO:0005829 cytosol cellular_component
GO:0000932 P-body cellular_component
GO:0043186 P granule cellular_component
GO:0005737 cytoplasm cellular_component
GO:0032574 5'-3' RNA helicase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0003723 RNA binding molecular_function
GO:0003724 RNA helicase activity molecular_function
GO:0004386 helicase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060526-371 Predicted to enable RNA binding activity. Predicted to be involved in mRNA cleavage involved in gene silencing by miRNA. Predicted to act upstream of or within gene silencing by RNA. Predicted to be located in P-body. Predicted to be active in P granule and cytosol. Human ortholog(s) of this gene implicated in hypertension. Orthologous to human MOV10 (Mov10 RISC complex RNA helicase).

Ensembl:

ensembl_id ENSDARG00000056065

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071316 True 3131 mRNA 0.46 22 27630692 27656765

Neighbor

gene id symbol gene type direction distance location
XLOC_036498 AL954868.1 coding downstream 23739 27596435 ~ 27606953 (-)
XLOC_036497 NA coding downstream 56609 27551224 ~ 27574083 (-)
XLOC_036496 TAFA3 coding downstream 115152 27361687 ~ 27515540 (-)
XLOC_036493 NA coding downstream 408659 27171708 ~ 27222033 (-)
XLOC_036500 mov10b.1 coding upstream 2479 27659244 ~ 27687095 (-)
XLOC_036501 BX664731.1 coding upstream 71205 27727970 ~ 27728086 (-)
XLOC_036502 cttnbp2nlb coding upstream 166247 27823012 ~ 27858465 (-)
XLOC_036503 NA coding upstream 512372 28169137 ~ 28228356 (-)
XLOC_036504 ddx20 coding upstream 584335 28241100 ~ 28259779 (-)
XLOC_036495 CR376741.1 non-coding downstream 423758 27203326 ~ 27206934 (-)
XLOC_036494 CR376741.3 non-coding downstream 429528 27183274 ~ 27201164 (-)
XLOC_036506 BX664742.1 non-coding upstream 637711 28294476 ~ 28295796 (-)
XLOC_036513 NA non-coding upstream 805739 28462504 ~ 28465453 (-)
XLOC_036514 NA non-coding upstream 871564 28528329 ~ 28546676 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000347_00105272_00119298 NA coding CI01000347 null 104917 ~ 119298 (-)