XLOC_003657 (per3)


Basic Information

Item Value
gene id XLOC_003657
gene name per3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 39959039 ~ 40021080 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007110
CTCCCGTCGGCCAACCTCACGTTGGACAGTGTGTTGCGTTCTGGCGGAGTAATGGAGGGACGCTCAAGAAACTGGAGCAAGTGATTAAACGTAAACGTAAACATCAAGCTCTTCAATGGAAGACTCTACATAAGCACCAGTAAAACGTCGTCATCACAATCCTGATGGATTTCTCCATAGACTGTCATTGTTAATGTGGACATCAGCAGCAGATCATCTGGGTTGTGAATCAGATCTTCAGTAGAGGAGGACAGGAGATCTCACAGGGAATGCCAGGGGGAGACGGCTTTCCTGATGGAGAGCAGGACAACTCTTCTCCAGGCCCAGACATACACACGGGCCAGACGGACCAAACCAGTAGTGGCCAAGACCCCGGGACCAGCGGGAACATTTCCGCATCTGGAGAGGAGGAAGAGGCGGAGGAGCGGATAGGAAGGAGAAGCAGCGGGTGTGAAGAGAGCGGAGGAGAGCAGACGCATGAGGATGTGGACATGAACAGCACCCACACCTCCAGCAGTGGAAATGACAGCATTCATCATcgtcaccaccatcatcatcgtcaccatcatcatcatcatcatcattcctCTTCCAACTGCAGCCCTGGCAGCACCACGGGATCAGGGAGCACTAAGAGCTCAAAATCCGCCACTGGTTCCTCGTCCTCCAGCTTTCACAGCACTCATCACACTGAATGCGGTGAGCAGACGGAGACCGGGCGcgagcacacacacagagagatgaTGCATACGGTGCAGGAGATGAAGAAGCGTCTGCCGTCTGAGAAGAGGAGCCGCAGTAAAGCCAGCACTGTGGAGGCTCTGCACTACGCTCTCAACTGTGTCAAACAAGTACAAGCAAACAGCGAGTACTACAACTTACTGATGAGCAGCGGCCTGGACGAGAGACGGGACGCCACTGTGTGCACACTGGAGGAGCTGGAGGGATTCACTTCTGAACACACACTTAAAAACACGGACTCTTTTGTGGTAGTTTTCTCTCTGGCCTCGGGGAAAGTGGTTTATGCGTCTGAGCAAGCCTCCAGTGTGCTCCACTGCAAGAGGAAGTTCCTGGAATCGGCCAAGTTTGTGGAGATGCTGTACCATCAGGACGTCAATGTGTTTTACTCTCATACCGCACAGCCACGACTGCCATCCTGGAACTTGGGCACAGACAGCGCGGCGGTTCTGTTTGAATGTGCGCAGGTCAAATCCTTCTTCTGTCGAATCAGAGGAGGGAAGGACCGGGATGGAGACATGCGCTATAGTCCGTTCCGGATCACTCCGTACCTGCTGAAGGTTCAGGGTTCCAGTGGAGAGGAGGAACCGTGTTGTCTGGCCCTCGCCGAACGCATCATCTCAGGATATGAGGCTCCTCGCATTCCTATGGACAAGCGCATATTCAGCACGACTCATTCACCAGGATGTGTCTTTTTAGAAGTGGATGACcgTGCGGTGCCTTTGCTCGGCTACCTCCCTCAAGACCTGATCGGTACCTCAGTCCTGACCTGCCTGCATCCAGACGACCGGCTGCTCATGCTGGCCATGCACCGCAAAATTGTGAAGTACGCGGGTCAGCCTCCGTTTGAGCATTCGCCCATCCGCTTCCGCTGTCAGAACGGAGATTACGTCACCCTGGACTCCAGCTGGTCCAGCTTCATCAACCCATGGAGCCGAAAGGTGGCCTTCATCATCGGCAGGCACAAAGTTCGCACTGGCCCTCTAAATGAGGATGTTTTCGCTGCACGGAGTAAAGCCGATCAGCCAGTCACGTGTGAAGATGTTAAAGAGCTGCAAGCCATGATCCACAAGCTGTTCCTGCAGcctGTTCATAATAATGGATCCAGTGGTTATGGCAGTCTGGGCAGTAACGGCTCTCACGAGCACTACATCAGCGTGGCTTCGTCCAGCGACAGTAACGGAAACCTCTGGGAGGATTCGCACAGAGAGACAATGACTCTGCAGCAGTTTTGTGCTGATGTTAATAAAGTGAAGAACTGGGGCCAACAGGCGTATCTGGAGTCGCGGAAAAAACTCACAGCTCTTGGACCAGCAACTGCAGTTGCAGGTGCAGGTGTTCATGCGAGCTCCAGTCACGATTTGGGGATTCGGGATCATCTGAAACAGTCTCTGCAAAAGGCCCGGAAACAACCACACATTCCCTCTTACCAGCAGATCAACTGTGTGGACAGCATCAtcagATATCTAGAAAGCTGTGCTACATCGGCTCTTAAAAGAAAGTGTGAATCTTTGTCCATCACTACATCTTCCTCGTCCTCCACCTCAGAAGAAGACAAACCTACATCTGCTGCACATGAAAACACTGACGAGGCTGCTCTGGACGCCGCTCGAGCTCTGGACAGTCAGGTGTCTGCAGGTTCAGCCACGACAGCAGCGGTGGTCGGAGCTCCACTAACAGACATCACCATCTCCACTGAGGCCATGAGTGTGGTGTCTGTGACCAGTCAATGCAGCTACAGCAGCACCATCGTCCACGTCCCACAGCCTGAGTCCGAAGTCACTGCATTAGAAGACGCTCCGATGGGCAGTGAGCCAGCCGACTCCGCCCCTGCTCCTGCAAGCCCCGCCCCTGATTCTGGCTCCGCCTCCACGTCTCAAGAGGAGCTGCTGGTGCTGGGACTGACCAAAGAGGTGCTGTCGGCTCACACACAGAAGGAGGAGCAGCAGTTCGTGGACCGATTCCGCCATCGTATCCTGCAGAGTCCATACAGCTCGTACCTGCAGCAGGACAACAGCAGCAATGCACATTCACATCACAGAGGGGATGTTGTTCGTCAACCAAATAAACACAAGCGTCCCAAACCAGAGGATTCGTCCGACAGCTATGAATGCTCTCAGCCGGGCAACTACTGGTCTCTTCCAGGACCCACAGCGGCGCCTCACTCCTCCTGGCCGTCCTCAGAGTCCTCTCAGCCTCCGCCATCCAACATCGGCTTTGTGCCACCCATGGCAGTGCCCATGCAAACACCCCCATACTTCAACATCATAGGTGCGGATCAGCAGCCCGTCATGCTCCAGCCTGATCCAGGAGTCCAGAACCTCCAGCCAATGACACCCATGATGGTGGTCCTGCTTCCCAGCTTCCCCATGTACCCCCCGAACAATGGCATGTATTTTCCTATGGCGGCACCAGGGGTGGTTCCCTATAACATAGGCGGCTTCGTCCCGCCTGGAGCCCCTATGCCTGCTGAGGCTCCGTTGCAGGGTCATAACCTGGAGTCTGCTGGAGTCGGGGTGCCAGCAGAGCCGGACTCTATCCCTGAGCCGTGGTTTGGGGAGGATCTGGATGCAGCTCAGCCCACTGCGCTGTTCTCCAGCTCTCGCTCCAGTTCCCCCATCCAGCTCAATCTGCTGCAGGAGGAGCTGACCAAACCCAGCGAAGCACAGACCTCCACTAATGCTGACAGTCTGCAGGAACCCCACACCAAAACGgatgATGCTCGGAGTGAGTGTGGTCATCAGGACGCTCACTCGTCCTCCAGTGAGATGCTGGATCAGCTGCTGCAGGAAGACGCTCGCTCCGGCACCGGCTCCAATGCCTCAGGAAGTGGCTCCGGAGAGTCTGGAGGATCCCTGGGCTCTGGATCAGGACTAGGCTCAAACGGGACGTCTACCAGCCACACTGgcagcagcaacagcagcaagTATTTCGCCAGCAACGATTCCTCAGACACGTCCCGGAAAGCACGCAAATCCGCCGAGGCCCAGGAACGAGAGCGAAGCGGCTTCAAGAAACATGTGGACGACCCTCTGTGGAGCATGATCAAGCAGACGCCCGAACCCGTCATGTTAACCTACCAGATCAGCTCCAGGGATCAGGCTCAGGTTCTTCAGGAGGATCGAGAAAAACTGATTCTGATGCAGCCCATGCAGCCTTGGTTCACTTCGGACCAGAAGAAGGAGCTGGCCGAGGTTCATCCCTGGATCCAGCAGAACACCGTCCCGCAGGAGATCAACACACAGggtTGTGTAAGTTGTAACACAATAGAGCCGAATAAGAAGCTGAATCTTCAAACGGACTCTCCAAACCCTCCTGACATCTCTTGTCCACAAGACTGTCCACCACAGGAAAACAGACCCGATACAGACACCTGACATCACTCCAGtcctcagccaatcagagcagccGCTGGTCCCGCAACCACACAAAGAGCCGATTCCTGTCCGCTCACAGTGAGTCTGTACACTCGCAGGAGATGGACACTTCTCTCCGTTACAGACCATGGACCCAAATTACTGTGAATATCAGACTTTAATTTGGTAGTGATGTTTGTGCTTAGTTGCTCTAATATGtcttttttaaagcagtttttaagggggtcatgaactgagaaatTTAAAATCTATTCAAATGAATTAATATAACAGGTCAGTGCTCTATTAAAACATCCAGCCagctttaaaatgcaaaatattctCCCCAGCTTAAAAACAGACTATTATTGAAGCCAGTCTGCCAAAACGACAGGTTATGAATGTGCCTCTATGTAATAGTGTGACTAAGCCCCGCCTCCATAGAAAATCAACACCCATTTTTACATCACTGtctgtttagctccgcccacaAATATACATTGTATTAGGAAAATAGTTCAAGCCGAATTGTGGAGTCAAATTCAGTcagtttcacaattttttttaatggcttGTTTCCGAAGGTTTGACCCTTCATTGCTATACTAGTAAAACATTAAAGTGTAGTGGAAAACATTGCACAATAAATACAGGAAAATGTGTGAGGGTGACTACTTTTTTCTGCGCAACAAGCAAGTGCCAGAAGCATTAAGTTGCTCAGCGCCACCTTTTGTCCCAGGGtatttctgtttttcattaaAGGTgctatatcagggctcgaaatatGCGCCCTAAATCTTATCAgtgtgacctcaaaatatatttgggagcatttgtgcataaaattgttgtgagcgaccagtttttactgcaagaTGTttaccacatgcgcggattcaggtgacattcacgcagaatgcatctttgcacttgaaacgtgaaacgcagcgctcagggatggttttaaacagttgtcatgtcaacttgctgctgtaaacaaagccaagtgcgtaatgcttgccccgccttcgcgctcttcttattggcccattgctctagaactgaacgcaAATGGATTGGTTAAAATCATCTGTCAATcacaatcactcagtcaatgccttctggcttgggttGACAGGGAGATTTACAACCGCGAaaatgtaaagcgctgaagatgagaatgaaaataacactgacagatttggTTTTGGAAACCAtgccatctaaagttacaaataatgacacatatTATTAgtaatcatgtgctgaatgttaatccaccatctacacttttagAAGAGTGGATAAAATCCATGTGTAAACCAAAAATTCGACCACCGCAGGACAGTAGCAGCAGTCTCGAAATGAGACATGGATTCAGAGTTAATACAATCCACATGTGGCGGTTTTTAATTTGCAAACAATAGAAATACTACCCATGTAAACATTGTCTGAGCAGTTTACAGTGTCATGCAGAGCACCGCGTCACTCTCTCTTGTTTACCCACAGGATGTTTTTCACCTCAAGCTAATTTTCCACCTGATTATTTGAAAAACAACCACAATTGGCGCAAAGTCCATGTGATCACTGCAAATACGTTTATACGTTACGCTTTATTCTTGCCGCCTGTTGGACAATAAACTAATCTACTTGCATTAATACTtttgaatattttgaatttggactgcagtAACTAGTTCAATCACATGGTAGTTATACTCTATCATACTTTGTGCACCTTTGGCTGTCATCAATTGACACAGTTGGGGCGAAGTCTGCGTTATTGTGCAAATACTTTGTGCATTTCGATTCATTCTCAATGCAATCTACTTGCATAAATACTTTCGATTTTAACTCGCTGCTGTTGGTATCGTTAATCTTACATCTTGTGTGTGCATCAAAACAAACCATCCAGTATTTTAAATTTGGACTGcagtacctagttcaaccactaggtggTACTTACTGCCTTGCGTACTTACTGCCCCTTTAACCGCCATCAAATATCAGCAAGTGATTTTGCATTTTCACTCAGCTCATAAGTAGTAAAAGAATAGCTTGGGCATGAATACCAAAAAAACAAGTCTGCAAAACAACTGTGATTAAAAACTAAAGAACTGAGTGATTAAACAGTCATAATATTCAGAGGTGGTTTTTAATTTGCAAGTGTTAGAAATATTACTAATGTAAACATTGTCTGAGCCGTTTACACTGTCATGCAGAGCAGCGCATCACTCACTCTAGTTTACCCGCAGGATGTTTTTCTACCTCAAACTAATTTTCAGGTCAAGttgaaatatttgtatttgtactAAAGACATGATTGGCGCAAGTCCATGTGATCTCTGCAAATACATTGTGTATTTCGCTTTATTCTTGCCGCCTGATGGAAATTTACCCATGTAATCTACTTGCATGAATACTTTCGATTTTGACTCGCTgttgttggtgtcgtcaatctgacATCCAGTGTGTAGGTCAAAACAAAGAATACAGTATTTTGAATTTGAACTGCAGTACCTCATTTAACCACTAGGTCCTACATACTCAGTCCTACATAATGTCCTTTAACAGCCCTCGAATGTCAGCAAGTGATTTTGCATTTTCACTCAGCTCATTTGCCATAAAAAACTGCTTGAAAGAAACGTCCCAGAAAAACAATTGTGATTTAAAACTAAAGAGTTGAGTGATTTAAGAGTTCTAAATTCAGAGTTGGTTTTTAATTTACAAGCGATACAAATATTACCAATGGTAACATTATCTGAGCAGTTTACAGTGTCATGCAGACCACCAGGTCCCTCTCTAGTTTACctgcagaatgttttttttttttttttttacctcaagcTAACTTTTAGATCAAGTTGAATTATTTGAATTTGTACTAAAGACACATTTGGCGCAAAGTCTGCATGATCGCTGCAAATACGTTGTGCATTTCACTTTATTCTCGCCGCCTGGTGGAAATTCGTCTATGTAATCAATCTACCTGCGTGAGTACTTCCGATTTTAAGTCGCTTCTGTTGGTGTCGTCGATCTTACATCTTGTGCGTGCATCAAAATAAACCATCCAGTATTTTAAATTTCGACCGCAGTACCTAGTTAAACCACTAGGTAGTCATactccatcatagtttatgcacctTTGACCGCCAACTAATATCAGAAAGTGATTTAGCATTTTCATCTCAGctcatttgcagtaaaaaaatctGGTTGGGCatgaatggcaaaaaaaaaagtctcggTAAAACAATTGTGATTAAAACTAAAGAGTTGAGTGATTGAAGAGTTATAAAATTCAGAGGTGGTTTTTAATTTGCAAGCGATACAAATATTAGCAAAGGTAACATTATCTGAGCAGTTTACAGTGTCATGCAGAGCAACGCGTCATTTCTCTAGTTTACCCGCgtgatttttataatttttttacctcAAGCTAACTTTTAGATGGAGTTAAATTATTAGAATATGGACTGAAGACACAATAGGAGCAAAGTCCGCTTGATCGCTGCAAATACGTTGTGTATTTCACTTCAATTTCGCCGCCCACTGGAAATTCGCCTTTGTTATCAATCAACCTGCGTGAGTACTTTCGATTTTGAGTCGCTTCTGTCGGAGTTGTTGAGCTTGCATTTTGTGTgtgcatcaaaacaaaacatccagtgttttaaatttgaattgcagtacctagtttaaccactaggTTGTCATACTCCATCATACTTGATGCACCTTTAGCCGCCATCTAATATCAGGAAGTGATTTTGCATTTTCACTcagttcatttttaattaaattgagtTATAAGCTTCCCAGTGTGTACAAGACTTTATTTGTAAATACTGTCGAacacacacagaagcacacaCATTCATAAATATGTTAAACCGTCGGCCAATCACACTTGTGGGCGTCGACCATGCATATGTAAACAGTGTATTCAGATGAGGGATGTCAAACCTATTATTTCTAAATGCTAAATGTTGATATAAGCGGACCTTGAGAACAGTACAATCTCATAAAACATGCAGTTCATGAcccttttaattaaatatatgtcCTCCTCTGAGCTCAGGAGGGTTTATGATCTTCAGTAGTGAGTTTCTCTCTGACCactaaatgaatataaatgtccCACAATGCCGCAGCATCACTAAAGAACGTCTAAAAGCACCAAAACTGAATGAAAGTCATCGCTGTGGTTTTTAATAGCTGCTTGTTTTGTTTGAGCGCtgcttgttttgctttattttcctTTAAGATCCTTTCCTGAGAGATGATCTTCTAATGACTAAATTCGTTTAAGTCAGACACATCATTTGAATGAGGCCTTAAATCTGTTTTTCCTGTCCACGTGTTTGTTCGTTTTCATCTATAGATGTGACTGAAAGATGTCCAGCAAGGGTTTTCTATGGTTTAACACTCTCAGTGATGGTGTAATTCGAAGATACAgacagatttattttttcttgggTGACGAAAACATACATGAGTCtcgtttttcttttaaaaaagtaattgcGACATTAGGTCTCAATTCTGAGGGGAAATAAAATCTGAGATATGACTATAAATCAGAAATATTTTAAGATCTGAACCAAGTGCAAGGTGTTAACTTCCATGTTTTGTTTTCCATGCCGAGAGAAGCTTGCATGTTTCACCCAAGTGAAAATTTCAGGACACATAAAAAACATGATAATTTAATAAAGATtaacataagtgtgtgtgtgtatctagaCTGCCTGACAAACGTCTTGTCGCCTAATCAAGTTTtaggagcagcaaataataacttgacttctagttgatcatttggtatcagaagtggcttatatgaaaggcaagagcctctagattacacttaatttaccaaaataaaacatgatcatgtcttgatttttaattattgaattagggcagtaaggtctgactttgcttagacgaaagtcttgtcactgaacagaaataatgtccagtatagaatataaagtcatgctgcagtggagacagaatgaatattgtgtctgactccatcatgagcttggaggactgcatcatacatctctgcaatgcctcaatcacttattaataaagtcatctggaatggcgaagaaagagttcttgcaggactcccagagttcatcaaaatcctttggattcatcttcaatgcctcctccatcatcttacTTCAGATATGCtcgataatgttcatgtctggtgactggggtggtcaatcctggagcaccttgaccttctttgctgtcaggagctttgatgtggaggctgaagcatgagaaggagcgctatcctgctggagaatttgccctctcctgtggtttgtgatgtaatgggcagcgcaaatgtcttgatacctcgccacagccatatcaccctgcagcccaagaccggttactcactgaagctaagcagggctgagcctggttagtacctggatgggagaccactagggaacactaggttgctgttggaagtggtgttagtgaggccagcagggggcgctcaacctgtggtctgtgtgagtcctaatgccccagtaaaagtgaaggggacactatactgtcagtgggcgccgtctttcggatgagacgttaaaccgaggtcctgactctctgcggtcattaaaaatcccacggcacttctcgtgaaagagcaggggtgtaaccccggtgtcctggccaaagtccctctatcggcccttacgatcatggcctcccaatcatccccttccaccgaattggctcgatcactgtctctccactccaccttaagctggtgtgtggtgagcgcactggcgccgttgtcctgtggctgccgtcgcatcatccaagtggatgctgcacactggtggtactgtggagagacccccctcatgattgtgaagcgctttgggtgtatggccatacacaataaatgcgctatataaatacacattacataaaatacacattacattacattacattacattacattacctcaggctgctgatgttgccgtccactctgcagatctctcgcacacctccatactgaatgtaaccccaaaccatgatttttccttcaccaaacttgactgatttctgtgagaatcttgggtccatgtgggttccagtaggtcttctagagtatttgtgatgattgggatgcagcaacAGATATTTCATCAGAAAAAttcaccttctgccacttttccaaatgatcaactagaagtcaagttattacttgtaGCTCTTAAaattgggatcgacgacaagacttttgtcaggtagtgtatacatttaaaatgtaataattttggaaaataaattacaaatcttttaaatttttaaaagaaaataatatatattatatagaatatcattattgttattattattataattataaaatttctGGTGAATTGTAAGCTGAACACATTTCATGCTCTTCACTAGTAAACCATAAAACTCTTCAAATCCTTCATAAAGTTCTTGGAAAGACCAGCTCACTGCAGCGGTCCACAGTTGCACCAGACCTCATTTTTATCatcctgtgttttgttctttatttattgATCTGTCGTGTTCagaagaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgcgtgtgttttCTGTGGTTTTCCCCATTTTCACATCAGTTGTAGTTTGACATAGCCGCTGTCGCCACCCAACACAAAGCTTCTGATCTGTACAGTTTTGTGATCGAAAGATAGATTTTGTACAGTTTTTAGGAAGAAGTGTAAATATCACTATAATGTATTTTacgtaaaaaaaaacaaggtgcAAAATTCAGTAACTATGAAAAAGCCATTTTGTCTCAAATTTCAGGGAACTATTTTGTGACGCCACATGATGACTATGAATAAAGACCACAATGACTTCAA
>TCONS_00007111
GCTCTTCAATGGAAGACTCTACATAAGCACCAGTAAAACGTCGTCATCACAATCCTGATGGATTTCTCCATAGACTGTCATTGTTAATGTGGACATCAGCAGCAGATCATCTGGGTTGTGAATCAGATCTTCAGTAGAGGAGGACAGGAGATCTCACAGGGAATGCCAGGGGGAGACGGCTTTCCTGATGGAGAGCAGGACAACTCTTCTCCAGGCCCAGACATACACACGGGCCAGACGGACCAAACCAGTAGTGGCCAAGACCCCGGGACCAGCGGGAACATTTCCGCATCTGGAGAGGAGGAAGAGGCGGAGGAGCGGATAGGAAGGAGAAGCAGCGGGTGTGAAGAGAGCGGAGGAGAGCAGACGCATGAGGATGTGGACATGAACAGCACCCACACCTCCAGCAGTGGAAATGACAGCATTCATCATcgtcaccaccatcatcatcgtcaccatcatcatcatcatcatcattcctCTTCCAACTGCAGCCCTGGCAGCACCACGGGATCAGGGAGCACTAAGAGTGAGCAGACGGAGACCGGGCGcgagcacacacacagagagatgaTGCATACGGTGCAGGAGATGAAGAAGCGTCTGCCGTCTGAGAAGAGGAGCCGCAGTAAAGCCAGCACTGTGGAGGCTCTGCACTACGCTCTCAACTGTGTCAAACAAGTACAAGCAAACAGCGAGTACTACAACTTACTGATGAGCAGCGGCCTGGACGAGAGACGGGACGCCACTGTGTGCACACTGGAGGAGCTGGAGGGATTCACTTCTGAACACACACTTAAAAACACGGACTCTTTTGTGGTAGTTTTCTCTCTGGCCTCGGGGAAAGTGGTTTATGCGTCTGAGCAAGCCTCCAGTGTGCTCCACTGCAAGAGGAAGTTCCTGGAATCGGCCAAGTTTGTGGAGATGCTGTACCATCAGGACGTCAATGTGTTTTACTCTCATACCGCACAGCCACGACTGCCATCCTGGAACTTGGGCACAGACAGCGCGGCGGTTCTGTTTGAATGTGCGCAGGTCAAATCCTTCTTCTGTCGAATCAGAGGAGGGAAGGACCGGGATGGAGACATGCGCTATAGTCCGTTCCGGATCACTCCGTACCTGCTGAAGGTTCAGGGTTCCAGTGGAGAGGAGGAACCGTGTTGTCTGGCCCTCGCCGAACGCATCATCTCAGGATATGAGGCTCCTCGCATTCCTATGGACAAGCGCATATTCAGCACGACTCATTCACCAGGATGTGTCTTTTTAGAAGTGGATGACcgTGCGGTGCCTTTGCTCGGCTACCTCCCTCAAGACCTGATCGGTACCTCAGTCCTGACCTGCCTGCATCCAGACGACCGGCTGCTCATGCTGGCCATGCACCGCAAAATTGTGAAGTACGCGGGTCAGCCTCCGTTTGAGCATTCGCCCATCCGCTTCCGCTGTCAGAACGGAGATTACGTCACCCTGGACTCCAGCTGGTCCAGCTTCATCAACCCATGGAGCCGAAAGGTGGCCTTCATCATCGGCAGGCACAAAGTTCGCACTGGCCCTCTAAATGAGGATGTTTTCGCTGCACGGAGTAAAGCCGATCAGCCAGTCACGTGTGAAGATGTTAAAGAGCTGCAAGCCATGATCCACAAGCTGTTCCTGCAGcctGTTCATAATAATGGATCCAGTGGTTATGGCAGTCTGGGCAGTAACGGCTCTCACGAGCACTACATCAGCGTGGCTTCGTCCAGCGACAGTAACGGAAACCTCTGGGAGGATTCGCACAGAGAGACAATGACTCTGCAGCAGTTTTGTGCTGATGTTAATAAAGTGAAGAACTGGGGCCAACAGGCGTATCTGGAGTCGCGGAAAAAACTCACAGCTCTTGGACCAGCAACTGCAGTTGCAGGTGCAGGTGTTCATGCGAGCTCCAGTCACGATTTGGGGATTCGGGATCATCTGAAACAGTCTCTGCAAAAGGCCCGGAAACAACCACACATTCCCTCTTACCAGCAGATCAACTGTGTGGACAGCATCAtcagATATCTAGAAAGCTGTGCTACATCGGCTCTTAAAAGAAAGTGTGAATCTTTGTCCATCACTACATCTTCCTCGTCCTCCACCTCAGAAGAAGACAAACCTACATCTGCTGCACATGAAAACACTGACGAGGCTGCTCTGGACGCCGCTCGAGCTCTGGACAGTCAGGTGTCTGCAGGTTCAGCCACGACAGCAGCGGTGGTCGGAGCTCCACTAACAGACATCACCATCTCCACTGAGGCCATGAGTGTGGTGTCTGTGACCAGTCAATGCAGCTACAGCAGCACCATCGTCCACGTCCCACAGCCTGAGTCCGAAGTCACTGCATTAGAAGACGCTCCGATGGGCAGTGAGCCAGCCGACTCCGCCCCTGCTCCTGCAAGCCCCGCCCCTGATTCTGGCTCCGCCTCCACGTCTCAAGAGGAGCTGCTGGTGCTGGGACTGACCAAAGAGGTGCTGTCGGCTCACACACAGAAGGAGGAGCAGCAGTTCGTGGACCGATTCCGCCATCGTATCCTGCAGAGTCCATACAGCTCGTACCTGCAGCAGGACAACAGCAGCAATGCACATTCACATCACAGAGGGGATGTTGTTCGTCAACCAAATAAACACAAGCGTCCCAAACCAGAGGATTCGTCCGACAGCTATGAATGCTCTCAGCCGGGCAACTACTGGTCTCTTCCAGGACCCACAGCGGCGCCTCACTCCTCCTGGCCGTCCTCAGAGTCCTCTCAGCCTCCGCCATCCAACATCGGCTTTGTGCCACCCATGGCAGTGCCCATGCAAACACCCCCATACTTCAACATCATAGGTGCGGATCAGCAGCCCGTCATGCTCCAGCCTGATCCAGGAGTCCAGAACCTCCAGCCAATGACACCCATGATGGTGGTCCTGCTTCCCAGCTTCCCCATGTACCCCCCGAACAATGGCATGTATTTTCCTATGGCGGCACCAGGGGTGGTTCCCTATAACATAGGCGGCTTCGTCCCGCCTGGAGCCCCTATGCCTGCTGAGGCTCCGTTGCAGGGTCATAACCTGGAGTCTGCTGGAGTCGGGGTGCCAGCAGAGCCGGACTCTATCCCTGAGCCGTGGTTTGGGGAGGATCTGGATGCAGCTCAGCCCACTGCGCTGTTCTCCAGCTCTCGCTCCAGTTCCCCCATCCAGCTCAATCTGCTGCAGGAGGAGCTGACCAAACCCAGCGAAGCACAGACCTCCACTAATGCTGACAGTCTGCAGGAACCCCACACCAAAACGgatgATGCTCGGAGTGAGTGTGGTCATCAGGACGCTCACTCGTCCTCCAGTGAGATGCTGGATCAGCTGCTGCAGGAAGACGCTCGCTCCGGCACCGGCTCCAATGCCTCAGGAAGTGGCTCCGGAGAGTCTGGAGGATCCCTGGGCTCTGGATCAGGACTAGGCTCAAACGGGACGTCTACCAGCCACACTGgcagcagcaacagcagcaagTATTTCGCCAGCAACGATTCCTCAGACACGTCCCGGAAAGCACGCAAATCCGCCGAGGCCCAGGAACGAGAGCGAAGCGGCTTCAAGAAACATGTGGACGACCCTCTGTGGAGCATGATCAAGCAGACGCCCGAACCCGTCATGTTAACCTACCAGATCAGCTCCAGGGATCAGGCTCAGGTTCTTCAGGAGGATCGAGAAAAACTGATTCTGATGCAGCCCATGCAGCCTTGGTTCACTTCGGACCAGAAGAAGGAGCTGGCCGAGGTTCATCCCTGGATCCAGCAGAACACCGTCCCGCAGGAGATCAACACACAGggtTGTGTAAGTTGTAACACAATAGAGCCGAATAAGAAGCTGAATCTTCAAACGGACTCTCCAAACCCTCCTGACATCTCTTGTCCACAAGACTGTCCACCACAGGAAAACAGACCCGATACAGACACCTGA
>TCONS_00007112
GCCAAGACCCCGGGACCAGCGGGAACATTTCCGCATCTGGAGAGGAGGAAGAGGCGGAGGAGCGGATAGGAAGGAGAAGCAGCGGGTGTGAAGAGAGCGGAGGAGAGCAGACGCATGAGGATGTGGACATGAACAGCACCCACACCTCCAGCAGTGGAAATGACAGCATTCATCATcgtcaccaccatcatcatcgtcaccatcatcatcatcatcatcattcctCTTCCAACTGCAGCCCTGGCAGCACCACGGGATCAGGGAGCACTAAGAGCTCAAAATCCGCCACTGGTTCCTCGTCCTCCAGCTTTCACAGCACTCATCACACTGAATGCGGTGAGCAGACGGAGACCGGGCGcgagcacacacacagagagatgaTGCATACGGTGCAGGAGATGAAGAAGCGTCTGCCGTCTGAGAAGAGGAGCCGCAGTAAAGCCAGCACTGTGGAGGCTCTGCACTACGCTCTCAACTGTGTCAAACAAGTACAAGCAAACAGCGAGTACTACAACTTACTGATGAGCAGCGGCCTGGACGAGAGACGGGACGCCACTGTGTGCACACTGGAGGAGCTGGAGGGATTCACTTCTGAACACACACTTAAAAACACGGTAAACCACAGGACACATCCTCAGAAATATCACATGCTACTGGACAGACTCACTAAAACACAGTACTCTACAGAACATACAGTTGACATCAGAATTATTCactctcctgtgaaatttttcagtatttcccaaatgatgtttaacaggggaAGGAATTTTTCGCAGTATGtcctataatattgtttcttctggagaaagtcttacttgttttatttcggctagaatgaaagcaaaattattttaaggtcattattattagcccgcTTAAGCTGTATTAATTTTTGATTGTCTATAGAACAGACCATcattattaggggtgtaacgatacactcagctcacgatacaatgtgtatcacgatataatgttcaccattcgatatgtatcacgatatttggaataaaatttgaaaattaaactgaaatgcaaattttatttaaaaaaatttaattaccaagtaaactattttttatgtatttcttttgtttcaacttgttaaactgaacct
>TCONS_00007113
GCCAACAGGCGTATCTGGAGTCGCGGAAAAAACTCACAGCTCTTGGACCAGCAACTGCAGTTGCAGGTGCAGGTGTTCATGCGAGCTCCAGTCACGATTTGGGGATTCGGGATCATCTGAAACAGTCTCTGCAAAAGGCCCGGAAACAACCACACATTCCCTCTTACCAGCAGATCAACTGTGTGGACAGCATCAtcagATATCTAGAAAGCTGTGCTACATCGGCTCTTAAAAGAAAGTGTGAATCTTTGTCCATCACTACATCTTCCTCGTCCTCCACCTCAGAAGAAGACAAACCTACATCTGCTGCACATGAAAACACTGACGGTACGAGCCCTTCCAGCTCTATCTGTCGCCTCCTGAAATATCTGCATATGTTGATTTTTATTAACTCAATACCCCCCAC

Function

symbol description
per3 Predicted to enable transcription cis-regulatory region binding activity and transcription corepressor binding activity. Acts upstream of or within circadian regulation of gene expression and photoperiodism. Predicted to be active in cytoplasm and nucleus. Is expressed in central nervous system; hematopoietic system; oocyte; red sensitive photoreceptor cell; and visual system. Human ortholog(s) of this gene implicated in advanced sleep phase syndrome and advanced sleep phase syndrome 3. Orthologous to human PER3 (period circadian regulator 3).

GO:

id name namespace
GO:0032922 circadian regulation of gene expression biological_process
GO:0000122 negative regulation of transcription by RNA polymerase II biological_process
GO:0009648 photoperiodism biological_process
GO:0009416 response to light stimulus biological_process
GO:0043153 entrainment of circadian clock by photoperiod biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0008134 transcription factor binding molecular_function
GO:0001222 transcription corepressor binding molecular_function
GO:0000976 transcription regulatory region sequence-specific DNA binding molecular_function

KEGG:

id description
ko04710 Circadian rhythm
ko04713 Circadian entrainment
ko03400 DNA repair and recombination proteins

ZFIN:

id description
ZDB-GENE-000804-1 Predicted to enable transcription cis-regulatory region binding activity and transcription corepressor binding activity. Acts upstream of or within circadian regulation of gene expression and photoperiodism. Predicted to be active in cytoplasm and nucleus. Is expressed in central nervous system; hematopoietic system; oocyte; red sensitive photoreceptor cell; and visual system. Human ortholog(s) of this gene implicated in advanced sleep phase syndrome and advanced sleep phase syndrome 3. Orthologous to human PER3 (period circadian regulator 3).

Ensembl:

ensembl_id ENSDARG00000010519

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007110 False 11018 mRNA 0.45 23 39959039 40021080
TCONS_00007111 False 3945 mRNA 0.55 21 39969048 40014177
TCONS_00007112 False 1120 lncRNA 0.44 4 39969304 39977128
TCONS_00007113 True 406 lncRNA 0.48 3 39993997 39998798

Neighbor

gene id symbol gene type direction distance location
XLOC_003656 vamp3 coding upstream 2114 39928828 ~ 39956925 (+)
XLOC_003655 NA coding upstream 32167 39576541 ~ 39926872 (+)
XLOC_003654 NA coding upstream 479772 39373712 ~ 39479267 (+)
XLOC_003653 NA coding upstream 668405 39287369 ~ 39290634 (+)
XLOC_003652 NA coding upstream 675063 39262536 ~ 39283976 (+)
XLOC_003658 si:dkey-264d12.1 coding downstream 11710 40032790 ~ 40072301 (+)
XLOC_003659 NA coding downstream 90401 40111481 ~ 40116646 (+)
XLOC_003660 si:dkey-264d12.5 coding downstream 127101 40148181 ~ 40168378 (+)
XLOC_003661 si:ch211-193i15.1 coding downstream 187159 40208239 ~ 40215554 (+)
XLOC_003662 NA coding downstream 198975 40220055 ~ 40434080 (+)
XLOC_003369 CR854846.2 misc upstream 23835957 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 27247043 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 27264776 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 27273440 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 27279011 12679732 ~ 12680028 (+)
XLOC_003651 NA non-coding upstream 678148 39187531 ~ 39280891 (+)
XLOC_003669 NA non-coding downstream 843875 40864955 ~ 40865542 (+)
XLOC_003670 CABZ01044767.1 non-coding downstream 868100 40889180 ~ 40889294 (+)
XLOC_003671 NA non-coding downstream 870601 40891681 ~ 40956123 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00002092 NA coding CM030136.1 CM030136.1 3095720 ~ 3110908 (-)