XLOC_036725 (pimr189)


Basic Information

Item Value
gene id XLOC_036725
gene name pimr189
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 47209659 ~ 47212686 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071713
GAAGCCGGACCGAGCAACGCTACGTTCATCTCCCACATTCACACTGGAGCTGGTGTTTCACCAAGCCCAGCACCACAGACAAGAGAGAAGAAACTTAAGAGGCTCTGGAAATGGTTTTCTCGGAAATTCAAGAGAACTAGAACCAGAGCCCCACAGATCCAGCTGAGCAGCCCACAGCCTCAGAGATCTCCTGACGGCGAAGCTGCGTGTGTGTCGCCGAGGACAGTTCATGACGAGCGGGTCAACAGGCGCGTGTCTATCCAGACCCCTGTGAAGACCCCGTCAACAGAAACTGAACGGCACGACGACACTGAATACTGGGACTTTTCTGTATCTTCTCTTACCACAGCGGGAAACAGCGAATCCGACCGCGATTCAATGCACAGCTGGCACTCGTGCGCGTCTTCGCTTGGCACCCCGGTTAGTGAATCTGACCGCGCATCAGTGTTAAGTTGGCACTCTTGTGCGTCTTCGCTGGGTACCGCGGGCATCAGCGAATCTGACCGCGCTTCAGTGCACAGTAGGCAGCCTTGTGCGTCTTCGCTGACCGCTGAACACCACAACGATGAGGAAAACGCTTCCAGCGAGGACTCCAGCGTGTCCGAGGACAGCACATCTTCCTCATCGGATTTTTGGAAAACAGAACAGGAAACCACATTCAACTGGGAAGGAAATACAGgtAGAATCTCCCAGGACTATAAAATCCTTCACTTGATTGGTCAAGGATCAACAGGAGTCATCTATGAGGGAATCCGTCTGTCGGATTGCCGAATGGTGGATATCAAATGCGTGAAGAATACAAAATCAATGGAAAGGATCACGATTGAACCATCTGACAAGACTGTTCCACAAGAGGTCGGTTTGATGACTATGATGAGCAGAGGTCCGAAGGTTCCTCAAGTAATACAGCTGCTGGACTGGTATGAGGCACCAGATCAATACATACTGGTGCTAGAGCATCCCAAATCAGCTGTGAGCCTGGACCAGTTTGTATCCTCCTGTGGGAACAAAATCAGCGAAGCGAAAGCACGAGTGGTGATGCACCAGGTGATCACTGCTGCCAACGCATGCTGCGAAAGGGGAGTCTACAATAACATCAAGCTGGAGAGCCTGCTCATCAACCCCCACACCTTGCAGGTCAAACTGATGGACTTTGGCACCGGAAGCCTCATTAAGGACACAGGCTATACAACATTTTGGGGCTCAATGGCTTGTATTCCCCCGGAGTTCTATCAGAAGGGAAGGTTCCACGCCAAGCCTGCAATCATGTACTCTTTAGGCAAACTGTTGTTCAGGATGCTGTGTGGACGCTACCCTCATATGGAGCTCCACAAGATTGTCAAAAGAACCTGGCAGCCTGAAGACCTATCCAAAGAAGCCGTAGATCTGATCTGCTCGTGTCTGCAGAGTAAGCCAGACAAGCGGCTTTCACTTGACGAGATCCTTCACCAGAGGTGGTTCCAGGTCTTCATCCTGAAGCCAAACAACAGACGAAAAGATTAAGAAGATCAGAACATCCAGCCTCTTCATCCAGCCGTCAACACCAAACTTCTCCTCTTCATCGATCCACTAACACCGAACTCCTCCTCTTCATCCAGCCGCTAACACTAAGCTCCTCTTTTATATTCAGCCAGAAACTCCGTCAAGCCACGAACATGGGGCAGTTTGTGGCTTTACGAAGAGAAAAGGCTGAATGGGGCTGGTGTTTGTGGTTGTGTGGGAAGGAGGAGCTGTTTGGGGCCGGTGTTTGTGGTTTGATAAAGAGGAGGAGCTGAAGGGGGCCGGCGTTTGTATCTGGATGAAGAGAAGAagatttttggtttatttttggagattgtaaataaatgcTTGTTCTGTatgtaatgaataaaaatgaatacttTTCACATATAAA

Function

symbol description
pimr189 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000030634

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071713 True 1894 mRNA 0.50 6 47209659 47212686

Neighbor

gene id symbol gene type direction distance location
XLOC_036723 ppih coding downstream 3260 47152704 ~ 47206399 (-)
XLOC_036724 NA coding downstream 10494 47198634 ~ 47199165 (-)
XLOC_036722 ybx1 coding downstream 57573 47143829 ~ 47152086 (-)
XLOC_036721 NA coding downstream 115721 47090111 ~ 47093938 (-)
XLOC_036720 hes2.1 coding downstream 283400 46921333 ~ 46926259 (-)
XLOC_036726 NA coding upstream 44292 47256978 ~ 47258976 (-)
XLOC_036727 CR792439.2 coding upstream 62610 47275296 ~ 47275410 (-)
XLOC_036728 NA coding upstream 89685 47302371 ~ 47315226 (-)
XLOC_036729 pex10 coding upstream 107118 47319804 ~ 47329755 (-)
XLOC_036730 LO017720.1 coding upstream 293199 47505885 ~ 47506001 (-)
XLOC_036716 NA non-coding downstream 580281 46627663 ~ 46629378 (-)
XLOC_036701 NA non-coding downstream 1737442 45468994 ~ 45472217 (-)
XLOC_036699 CU695141.1 non-coding downstream 1797914 45411581 ~ 45411745 (-)
XLOC_036733 NA non-coding upstream 880109 48092795 ~ 48158753 (-)

Expression


Co-expression Network