XLOC_036731 (kank3)


Basic Information

Item Value
gene id XLOC_036731
gene name kank3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 47758621 ~ 47823318 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071717
GTATGAGTCGACGTCTAgtgaagaggaagaggaggaggaagagagtTCCTCTGATGGCAGCGAGGCTGGTGCTTGTTCAGACAGCAGTGTGGAAGAAGCAGCAGCTCTAGAGGACACGTCTGATGAAGAGATGAATATAAATGCGGATGAAAGTGATAGCGATGAAAACATGCCAGCAGGGACTGAAGAGTTAAAGGATCAGGCAGAGGAAGTGAAGGAAAAGTTTGAACTTAGCTCCAAAATGCGTGAGGCTTGCCTTATTTTGAAGAACCATCTTAACGACGGAGAAAAGGCTGTAAAGAGTAAAGAAGTGTTGTCCAGCACTCATAGCGTTCAGCTGGAGTGGTTTCGAGTATCCAGTGCAAAGATGGCCCAGCCATTACGTGTGTCAAATTACCTGATGGCGTTCTCCGAGGTCTCCCCCGTCCTGCTGGAGCACATTGTCAACATGACCGACGGCAACGGCAACACTGCTTTACACTACAGCGTCTCCCATTCCAACTTCGCTGTTGTGGACCTACTGCTTGACACAGGCATGTGCAATGTTAATCAGCAGAATAAAGCCGGATATACAGCTGTGATGCTGGCCGCTCTTTCAGCAGTGAAGGAGGAGGATGAAATGGCCGTGGTCCAGAAACTCTTCCGTCTGGGAAACGTCAATGCCAAAGCCAGCCAAgcAGGACAGACTGCTTTGATGCTGGCCGTCAGTCATGGGCGTCAGGAGATGGTGCGAGCGCTGCTAGATTGTGGCGCTAATGTGAACATCCAAGACGATGAGGGCTCCACCGCTCTAATGTGCGCAAGCGAACACGGTCGAGCTGAGATCGTCTCCTTACTGCTGGAACAGCCGGGGTGTGACATTTCAATCGTCGACAATGATGGCAGTAATGCTCTGTCCATTGCTCTGGAAGCGTCCCACAATGACATCGCTGTTTTACTGTACGCCCACATGAACTACTCAAAAACACAGGCGGATGCATCACCTAAAGCAAACTCCCGGAGCCCATCCAGCCCTAGAAAAACATGGCCCTCGGAGTAAAAAAAGGGCATATCACGAGCAAAAATGGATATAAAACGAACTAACTAGCTTTACTGGAAGATTAACAAAGCCTATGTTACAAGTCATATATACTGTATTACTGAATATTCATTTTTACGCACATATTTAATTAACTATGCTGCAGCATAACTATGTAAAATACTATGTATACacgttaatgtttactttttaatCTCCAAAAGGTGTATTTACTATGGTAAATGTATTATACCGTGATATCAGTGTTTGAAATAAGGTGTTTGGGATAAATCACAACATAGCTGAGATGTCATGTTGATTACAGGGTTCACAGACTTAACCTTTGTTTTGATTAGCGGTTTAGCTGCGATGTTTTGCTTGGCTTAGACAAACCCATCATTAAAAAGGGTTCAGACATATTGCTGAAGATTAAAGGAATGCTTGACTTTTTAA
>TCONS_00071718
ACAGTCAAGCAGATTATTTCAACGGGATCCCGCCACAGACTGGTAATCATTTACTAACTACGGAATGAACGGTAACTACGGGTCGACCGACGGCTGAAATCAATCAGCACAAACCCGGATTAATAACGCGCAAAGAAAAAGAAGCAGCAGCAAACTTCATCCATAGGGTGTGCTGATTTGTCTTCTGGAGGGGCAACAGAAGGCTACATAAAATGACCCAATCTGTGCACATAACCTCCAAAGTGCCAAATCTGAGTGCCCCTTTTCATTGCTCTGCTGAGGAAGAATCAGACCAAAGTGGTGCTTATTCTGTACAGACACCCTACGGATTCGAGCTGGACCTTGATTTCCTCAAGTATGTTGAGGAAATAGAGAGTGGGCACAGCATTCGTAGGGCTAATGTGCACCCTCGGAGAGGATCTAGGAGTGACAGGCGAAATTTGAGTACTGGGGGTCGAACCAGCGGCTGGACCTCCACCGAGTCCCTTTCCTCAACAACTAGTGAGAATGGTCAGACTAACCAACCTTTTCTCCAGAGCCCAATCACACCACCTTATAAATCACAGCCACTTTCCCCATTACCAGTGATCAGTCCCAGTTTACCTACTTTCTCAAAAGTGCCACCACCACCTCCACCACGTAACCCTAGGGTGGAAAGAACACTTCTTGAAACTAGCCTCCGGCTCCAACAAGAGCAAAGTCAGTTTTCCAATGGATTAGGCTCCAATTTGGCTGACCTTTCCAAAGTGAGTTCCAAAACCAATGTATCTAATAGGGACTTCTCTGTAGGTTCTTCACAGCCATCAGAAGCCCCATTGCTACCGATGTCACATGTTATGCAGAACCCCCTTTCTGGGGCATGGACCAGAGCAAGTCCTCAGACTTCCGGATGGAGCACTCCAGCCTCAAACTCAGGAACAATGCCTCCTGGGCAGCTTCAGACAGTTCGAGAACAGATGGCTGCTGCCCTTAGACAGCTGAGAGAGATGGAAGAAAGAGTAAAAGGAGTACCAGTCCTGGAAAGAGAAGTTGCCATGCTCCGTGCAGAAAAAGAAAGGCTATCTGTGGagcttcaaaataaaacaaaggaaCTTGAAGCAGCAATCAAACTGCAAGTACCCACTGAGGCAGTAGAGGAACAAGACAAAGAGCAAATCAAGAAAATACCAACCTTTGTTTTAGAAACAAAATCCATAGCAGTAGGTAATGATGTACCTCTTGAGAATGTGATAGTCTCTAATCGTCAAACGCTCAAGGATGCTGCCGTTGGATCAATCATCGATGTTTGTCACGCAGCTGTTGAAACTGAGGCTAATGCCATGTGTGATGAGGGAATTCAGACCACGGTGGATACAGAAGATGTGTCAGTCTGGGTCATTGAGTCATTTCTAGGGCTACAAAGCGAGGCGGAACGAGAAATTGACAACCTACAACACACCATCACGTTTCAACAGGAGTCAATTCAGGTTCTCGAGACACGATTAACTCAGGTCAACCAAGATCTCGAAACTTTAAGGGCTCAGGAAATTGAGAGAACCTCCAAGATCATGTTGGACAAAGAGACGACAGCTAAACCAGAGACAGTCAGCATCCGACTGGAAacatgtcctgaagtttgttcaGTGGGAGTGTTGTTTCCTGATGTGACTGACCCTGAGTATGATTTAAAAAAGGACCAAAGTATTCAAACAGATCCTGAGGAAACTTCTAAGGAACAACCTGTGGAGCTAATAAGCACTGGTGTCCAGTGGGAATGTCTTGATGACACTGAGCCACAAGACAGCGAGGAACAGACAACGTCTGCTGAGACTGCAGGCCCTCTGAAATCTATCATGAAGAGGAAGGATGGGAGTGGTGCTGGTGCAGCTTCCAGCAGCGGCAAAAAAAGCTTACAATTTGTCGGGATTCTAAATGGAGGGTATGAGTCGACGTCTAgtgaagaggaagaggaggaggaagagagtTCCTCTGATGGCAGCGAGGCTGGTGCTTGTTCAGACAGCAGTGTGGAAGAAGCAGCAGCTCTAGAGGACACGTCTGATGAAGAGATGAATATAAATGCGGATGAAAGTGATAGCGATGAAAACATGCCAGCAGGGACTGAAGAGTTAAAGGATCAGGCAGAGGAAGTGAAGGAAAAGTTTGAACTTAGCTCCAAAATGCGTGAGGCTTGCCTTATTTTGAAGAACCATCTTAACGACGGAGAAAAGGCTGTAAAGAGTAAAGAAGTGTTGTCCAGCACTCATAGCGTTCAGCTGGAGTGGTTTCGAGTATCCAGTGCAAAGATGGCCCAGCCATTACGTGTGTCAAATTACCTGATGGCGTTCTCCGAGGTCTCCCCCGTCCTGCTGGAGCACATTGTCAACATGACCGACGGCAACGGCAACACTGCTTTACACTACAGCGTCTCCCATTCCAACTTCGCTGTTGTGGACCTACTGCTTGACACAGGCATGTGCAATGTTAATCAGCAGAATAAAGCCGGATATACAGCTGTGATGCTGGCCGCTCTTTCAGCAGTGAAGGAGGAGGATGAAATGGCCGTGGTCCAGAAACTCTTCCGTCTGGGAAACGTCAATGCCAAAGCCAGCCAAgcAGGACAGACTGCTTTGATGCTGGCCGTCAGTCATGGGCGTCAGGAGATGGTGCGAGCGCTGCTAGATTGTGGCGCTAATGTGAACATCCAAGACGATGAGGGCTCCACCGCTCTAATGTGCGCAAGCGAACACGGTCGAGCTGAGATCGTCTCCTTACTGCTGGAACAGCCGGGGTGTGACATTTCAATCGTCGACAATGATGGCAGTAATGCTCTGTCCATTGCTCTGGAAGCGTCCCACAATGACATCGCTGTTTTACTGTACGCCCACATGAACTACTCAAAAACACAGGCGGATGCATCACCTAAAGCAAACTCCCGGAGCCCATCCAGCCCTAGAAAAACATGGCCCTCGGAGTAAAAAAAGGGCATATCACGAGCAAAAATGGATATAAAACGAACTAACTAGCTTTACTGGAAGATTAACAAAGCCTATGTTACAAGTCATATATACTGTATTACTGAATATTCATTTTTACGCACATATTTAATTAACTATGCTGCAGCATAACTATGTAAAATACTATGTATACacgttaatgtttactttttaatCTCCAAAAGGTGTATTTACTATGGTAAATGTATTATACCGTGATATCAGTGTTTGAAATAAGGTGTTTGGGATAAATCACAACATAGCTGAGATGTCATGTTGATTACAGGGTTCACAGACTTAACCTTTGTTTTGATTAGCGGTTTAGCTGCGATGTTTTGCTTGGCTTAGACAAACCCATCATTAAAAAGGGTTCAGACATATTGCTGAAGATTAAAGGAATGCTTGACTTTTT
>TCONS_00071719
ACAGTCAAGCAGATTATTTCAACGGGATCCCGCCACAGACTGGTAATCATTTACTAACTACGGAATGAACGGTAACTACGGGTCGACCGACGGCTGAAATCAATCAGCACAAACCCGGATTAATAACGCGCAAAGAAAAAGAAGCAGCAGCAAACTTCATCCATAGGGTGTGCTGATTTGTCTTCTGGAGGGGCAACAGAAGGCTACATAAAATGACCCAATCTGTGCACATAACCTCCAAAGTGCCAAATCTGAGTGCCCCTTTTCATTGCTCTGCTGAGGAAGAATCAGACCAAAGTGGTGCTTATTCTGTACAGACACCCTACGGATTCGAGCTGGACCTTGATTTCCTCAAGTATGTTGAGGAAATAGAGAGTGGGCACAGCATTCGTAGGGCTAATGTGCACCCTCGGAGAGGATCTAGGAGTGACAGGCGAAATTTGAGTACTGGGGGTCGAACCAGCGGCTGGACCTCCACCGAGTCCCTTTCCTCAACAACTAGTGAGAATGGTCAGACTAACCAACCTTTTCTCCAGAGCCCAATCACACCACCTTATAAATCACAGCCACTTTCCCCATTACCAGTGATCAGTCCCAGTTTACCTACTTTCTCAAAAGTGCCACCACCACCTCCACCACGTAACCCTAGGGTGGAAAGAACACTTCTTGAAACTAGCCTCCGGCTCCAACAAGAGCAAAGTCAGTTTTCCAATGGATTAGGCTCCAATTTGGCTGACCTTTCCAAAGTGAGTTCCAAAACCAATGTATCTAATAGGGACTTCTCTGTAGGTTCTTCACAGCCATCAGAAGCCCCATTGCTACCGATGTCACATGTTATGCAGAACCCCCTTTCTGGG
>TCONS_00071720
GAAAAACTCCGGAGGAGCGTAAACTCTTGTGCCTGGAAGAAAAAGCAAGGACAaaaATTCTCCTGGACACTCTTTTGTTTTCAGTATCGACCGTATGATTTGAGAATTCATCTTGTCACACCAAGGACAACAATGCAATTAATACAGAAGGTGTGCTGATTTGTCTTCTGGAGGGGCAACAGAAGGCTACATAAAATGACCCAATCTGTGCACATAACCTCCAAAGTGCCAAATCTGAGTGCCCCTTTTCATTGCTCTGCTGAGGAAGAATCAGACCAAAGTGGTGCTTATTCTGTACAGACACCCTACGGATTCGAGCTGGACCTTGATTTCCTCAAGTATGTTGAGGAAATAGAGAGTGGGCACAGCATTCGTAGGGCTAATGTGCACCCTCGGAGAGGATCTAGGAGTGACAGGCGAAATTTGAGTACTGGGGGTCGAACCAGCGGCTGGACCTCCACCGAGTCCCTTTCCTCAACAACTAGTGAGAATGGTCAGACTAACCAACCTTTTCTCCAGAGCCCAATCACACCACCTTATAAATCACAGCCACTTTCCCCATTACCAGTGATCAGTCCCAGTTTACCTACTTTCTCAAAAGTGCCACCACCACCTCC
>TCONS_00071721
ACAGTGGAAGATTTGTTCCGAGTTATACGCCTGCTCTGAGAAGTCACTGTTCCCATGTTGAAATTGGGGAATGTTATTCacaaagcttttatttttatggACCAAAACTGAAAGAAGAAACTAAAAGGTGTGCTGATTTGTCTTCTGGAGGGGCAACAGAAGGCTACATAAAATGACCCAATCTGTGCACATAACCTCCAAAGTGCCAAATCTGAGTGCCCCTTTTCATTGCTCTGCTGAGGAAGAATCAGACCAAAGTGGTGCTTATTCTGTACAGACACCCTACGGATTCGAGCTGGACCTTGATTTCCTCAAGTATGTTGAGGAAATAGAGAGTGGGCACAGCATTCGTAGGGCTAATGTGCACCCTCGGAGAGGATCTAGGAGTGACAGGCGAAATTTGAGTACTGGGGGTCGAACCAGCGGCTGGACCTCCACCGAGTCCCTTTCCTCAACAACTAGTGAGAATGGTCAGACTAACCAACCTTTTCTC
>TCONS_00071722
GCCATTTTGTGTCATGGCAATGAGCACAGCACGTCTCAACattatgaaaaaaatagtaatataaatatatttggaaAAACATTTATTATGGGTTGTGGTGCTTTTTACGTTACATTCAGCTTTGAGTTACCTTAAAATCGGTGTCATGTGCTCAGTCAGTTTTCCTTTCCGGATTTTTTACCATGGGTTTAACCGACCAACGGTACTTTTTGTTGTGGCCCGCCAAGCTACCGTTACTTCACGCCAGGATGGGTTTAATGCTtacaaaaatttataattttgagACGAAGAAAGTGTACTCGATCACAGGAAGGggccgggtcgagggggcagcagtcttaggagagaactccagacttccctctccccagacacttcctccagctcctccgggaggatcccgaggcgttccccaGCCAGAGGGAGAGacaaaggctgcgtccgaaaccgcctactactcagtagGATTGGAACCAGTTGTGTTGGAGGATCTTTTCAAGAGGAATCCGCTTGTCTGGCTTACTTTGCAGACACGAGCAGATCAAATCTATGCATTCTGTGAAGAAAGAAGGGAGAGATGTCAGGTCTTCAGGCTTCCAGGTTCTTTTGACAATCTTCTGGAGCTCTTTTAGAGGCAAACGTCCATACAGCAGGATGAACAACAGTACTCCTATAGAGTACACTGTTGCAGGCTTGGCGTGGAGCCTTCCACGTTTGAAAAACTCCGGAGGAGCGTAAACTCTTGTGCCTGGAAGAAAAAGCAAGGACAaaaATTCTCCTGGACACTCTTTTGTTTTCAGTATCGACCGTATGATTTGAGAATTCATCTTGTCACACCAAGGACAACAATGCAATTAATACAGAAGaactggaggaTCTGCAAGAAGGAATGGCGGAGGATgcccaaatccaggtgtgaaaaacgtgttgcatctttcccaaaaagactcaaATGAGTGCTTCTACTACTgtgcaaagggtctgaatacttaggaccatgtgctattttccttttttaataaatctgcaaaaatgtccacA

Function

symbol description
kank3 Predicted to be involved in negative regulation of actin filament polymerization. Predicted to be active in cytoplasm and cytoskeleton. Is expressed in several structures, including dorsal fin fold; fin bud; gut; neural tube; and vasculature. Orthologous to human KANK3 (KN motif and ankyrin repeat domains 3).

GO:

id name namespace
GO:0030837 negative regulation of actin filament polymerization biological_process
GO:0005856 cytoskeleton cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-081105-185 Predicted to be involved in negative regulation of actin filament polymerization. Predicted to be active in cytoplasm and cytoskeleton. Is expressed in several structures, including dorsal fin fold; fin bud; gut; neural tube; and vasculature. Orthologous to human KANK3 (KN motif and ankyrin repeat domains 3).

Ensembl:

ensembl_id ENSDARG00000076566

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071717 False 1471 mRNA 0.45 7 47758621 47770365
TCONS_00071718 False 3387 mRNA 0.46 11 47758623 47800754
TCONS_00071719 False 857 mRNA 0.48 3 47775008 47800754
TCONS_00071720 False 617 mRNA 0.47 4 47775231 47818282
TCONS_00071721 False 493 mRNA 0.46 3 47775332 47785951
TCONS_00071722 True 1041 processed_transcript 0.44 6 47810764 47823318

Neighbor

gene id symbol gene type direction distance location
XLOC_036730 LO017720.1 coding downstream 252620 47505885 ~ 47506001 (-)
XLOC_036729 pex10 coding downstream 428866 47319804 ~ 47329755 (-)
XLOC_036728 NA coding downstream 443395 47302371 ~ 47315226 (-)
XLOC_036727 CR792439.2 coding downstream 483211 47275296 ~ 47275410 (-)
XLOC_036726 NA coding downstream 499645 47256978 ~ 47258976 (-)
XLOC_036732 si:dkeyp-104h9.5 coding upstream 6043 47829361 ~ 47844456 (-)
XLOC_036733 NA coding upstream 269477 48092795 ~ 48158753 (-)
XLOC_036734 NA coding upstream 345582 48168900 ~ 48169336 (-)
XLOC_036735 NA coding upstream 722735 48546053 ~ 48548092 (-)
XLOC_036736 clcn6 coding upstream 806177 48629495 ~ 48669127 (-)
XLOC_036724 NA non-coding downstream 559456 47198634 ~ 47199165 (-)
XLOC_036742 BX323556.1 non-coding upstream 955643 48778961 ~ 48790587 (-)
XLOC_036743 NA non-coding upstream 972140 48795458 ~ 48798032 (-)

Expression


Co-expression Network