XLOC_036732 (si:dkeyp-104h9.5)


Basic Information

Item Value
gene id XLOC_036732
gene name si:dkeyp-104h9.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 47829361 ~ 47844456 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071723
ATGTGGCTTCAGCAGAGATTAAAGGGGCTGCCCAGTTTGCTCTCCAGCAGCTGGGCCCGTCGTGTTTTGGTTGGACTACTGGTTTTCCTCATTTTCTACTACTGGTTCCTAAGTTCAGATGGCTTGCTGAAGCTGTTCAGCATGTCCAGGGAGCCCGGGGGGGCTGCGGGGGTGTGTTTGCAGACTGATCTTCACAGGTGGGTGTCTATGGCGGACCGAGGGGATGGAGTAGTTCACACCCCTCAAACCAAAGAATCTGGAACATTTGTGGTCGGCAATGGACATTTTCTAGTGGATGTGGATTCCAATAAACTTTGGGTTGCTTCATCTACGCAGCCTGGATCTGCACCGGTTCACCAAACCGACTACAGCCCGATTGCGCGGTTGCAGGTGCCAGGAACGCGCTCCGAAGCGCAAGCCATGATGCTGTGGTATAGAAAAGGCTCAGTTCTTTCCTCTCGGTGCTTCCAGACAGCCAAATCTCAGTCTTCTCGTGACTGCATTGTCATACGAGAGGAGTTCATTGCGCACCGCAGCCGACACAATGTTCATCTCCAGAGAATCCTCATATCAAACCCTACAGATCACATGGTTTCCGTTGACATGTCCTTGGAGTCTCTTTCATTTAGGAGCAAAATGGAGAAGATGGACGATAAAGAGTTTGCGGTGTCCTCCGGAAGGGTGCTCACTGAAAAGAAGGACACCGTGTTGGTGGTGGTGGCCACGAATAGAATAAGCAACAAGATTCAGGTTCCTTCTAAATCCGAGTACTCGGCAAACCTGGTGAGCGTGATTCACACTTCAGAGCCCACTGAGGGCGGGAAACTGGACGACACCTTGGATAAACTCAGAGACAGAGTCCGAAAAGAAATGGTGGATGTCCTCCGGGTTGATGTTGAAGAATTGATGCAGGAGCATCAGCAAGCGTGGGTGGATCTCTTCATATCTGGTGTGGAAATCCGAAAGATCACAGATGCCCACACTCCGTCCAGTCGAACAGTCAACAACACCCTATACTACATTCTGTCAACCTCCACGGCGCCTCTACTGGACCAAAGCCTCACCTCCGAAGACCACGAGCACCTGGAGTCCAGTCTGAATTATGCTGATCACTGCTTTAGTGGCCACGCCACCATGCATGCAGAGAACCTCTGGCCAGAGCGGCTAACAAACGTAGCACAGATCCTTCAGCTCGTGAATCTCTGGAACTTAACCCTTCAGAAAAGAGGATGCAAGGTGCTGGTGGCTGCAGGAACTCACGGCATGATGCAAGGTATGGTCCTTAGCTTCGGCGGTCTCCAGTTCACCGAAAACCACCTTCAGTTCCAGGCTGATCCAGATGTTCTTCACAACAGCTACTCTCTGAGAGGTATCCATTACAATAAAGATCTTATCAACCTAGCGGTGCTGCAGGACATCGAAGGAAAGCCGTTCCTGCACGTTTCCGTCAAGCCTCAGGAGAAACCGGTCAAGCTGTACGCCTGCGAGGCCGGTTGCATGAACGAACCTGTGGAGCTGACCTCAGAACTGAAAGGACACACGTTTCCAGTAATGGTCACCCAGCCTATCACGCCGCTACTCTACATCTCTACTGATCTCACTCACCTTCAAGACCTGAGACACACGATGCACGTCAAGGCCATCTTGGCTCACGAGGACCACATGGCCAAACAGTACCCCGGCCTGCCTTTCCTCTTCTGGTTCAGTGTGGCGTCCCTCATCACGCTCTTCCATTTCTTCCTCTTCAAACTCATCTACAACGAGTACTGCGGACCCGGAGCCAAACCGCTCTTCAGGAGTAAGGATGATGCTTCTGTCTGAAGCCTAATCCAGGGTGCAGAAACATTAAAAGTGGCGCTGGATGTCCTCTCAGGATTGATTTTAATGGCTGGAGAAGTAGCAGTGTATATAAAACATgcttgttgtgttgtgtttaatATTGGACATCAGCTGATTTGTGGTAAACGTTGctgaatttaaaatatgaagACTTGAGGTGCAAatttgtgtgtgttaatgcaaAAAATATCAACAGTTATGAAGGATTTAGACAAGCCTTGTAGTAATTTATTCTTTTGGCTTAATCGAGCACAATAATACAATCTTAATGGAGAATTGAGATTTGAGTTTAACACGCAGCTACATCTTTAAACCTTCGCTGATTTGATGTGAATTTGtctataaaatgttataaatgcaACAAATGGACAAAACTGCAACTGATTTTCTTTTGTATTCCAAGTAATCCAAGTCaaattgacttaaaaaaaaacaaaaaaaaaacaattggttTGCTGACTTGGTACTTTAATTTCCCATAGTTTGTGTTTCTTGGGcgtttttacatttatatgcttACAAATTGCATAATTGGACATTGACGTCTAATGCAATATATTGGTTTAAAAAGTCACTTTgacaaatttaaaactttaaattgaAAAGCTACTGCGCATTGAGATATTTAGACTGATAAttaccaggctttttttttttttaagagtaggCCTAAACAAGTTTGGCTTATGTCAGCAGAGAGATGCCTGATGTATATAAACCCCTCATACCATACCatgcttgcaaaataaaagaaaataagtcTGTCATTGACACtatctttaaaattaaaataagatttttatttaaaaa

Function

symbol description
si:dkeyp-104h9.5 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human KIAA2013 (KIAA2013).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-449 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human KIAA2013 (KIAA2013).

Ensembl:

ensembl_id ENSDARG00000073801

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071723 True 2649 mRNA 0.45 3 47829361 47844456

Neighbor

gene id symbol gene type direction distance location
XLOC_036731 kank3 coding downstream 6043 47758621 ~ 47823318 (-)
XLOC_036730 LO017720.1 coding downstream 323360 47505885 ~ 47506001 (-)
XLOC_036729 pex10 coding downstream 499606 47319804 ~ 47329755 (-)
XLOC_036728 NA coding downstream 514135 47302371 ~ 47315226 (-)
XLOC_036727 CR792439.2 coding downstream 553951 47275296 ~ 47275410 (-)
XLOC_036733 NA coding upstream 248339 48092795 ~ 48158753 (-)
XLOC_036734 NA coding upstream 324444 48168900 ~ 48169336 (-)
XLOC_036735 NA coding upstream 701597 48546053 ~ 48548092 (-)
XLOC_036736 clcn6 coding upstream 785039 48629495 ~ 48669127 (-)
XLOC_036737 pimr183 coding upstream 829140 48673596 ~ 48675775 (-)
XLOC_036726 NA non-coding downstream 570385 47256978 ~ 47258976 (-)
XLOC_036724 NA non-coding downstream 630196 47198634 ~ 47199165 (-)
XLOC_036742 BX323556.1 non-coding upstream 934505 48778961 ~ 48790587 (-)
XLOC_036743 NA non-coding upstream 951002 48795458 ~ 48798032 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000050_05851079_05852014 NA coding CI01000050 null 5850987 ~ 5852064 (-)
bowfin (Amia calva) AMCG00002202 LOC107595762,LOC107602448,LOC107735586 coding CM030136.1 CM030136.1 7110777 ~ 7119186 (+)