XLOC_036822


Basic Information

Item Value
gene id XLOC_036822
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 53781481 ~ 53781852 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072568
catgtgtttttgttgGCATGTGCCTGCATGCATGTGggcatttgtgtatgtgtatgtatgcttatgtgtgtgtgtgtgtgtgtacatatatgcaCTCATGCATGCTTGTATTTTCAGCCAACCagaacaggaatcacaggactccACCAAGTCAAGGTCCGGGTCATAATACACAGAAGACAACACCGCTCGCTCTGACAGCCAGACTGTAAGCATCACGAATAATCGCACTGTTACACACCTAAAGTCTTAATCAGGAACACTTCATTATGAATAAAGCTCATCATAAAGTAACGCCTGCATCATTGTTGTCCTCAGATGATTTGGGAATCGTGTACGTGTGTTCACAGCCCAACAGCAGAGCCAGAAGAA

Function

GO:

id name namespace
GO:0022803 passive transmembrane transporter activity molecular_function
GO:0015267 channel activity molecular_function
GO:0005216 ion channel activity molecular_function
GO:0015075 ion transmembrane transporter activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072568 True 372 lncRNA 0.44 1 53781481 53781852

Neighbor

gene id symbol gene type direction distance location
XLOC_036821 apeh coding downstream 7942 53747925 ~ 53773539 (-)
XLOC_036820 tlr9 coding downstream 46082 53730368 ~ 53735399 (-)
XLOC_036819 wnt5a coding downstream 100828 53670395 ~ 53680653 (-)
XLOC_036818 lrtm1 coding downstream 132187 53639625 ~ 53649294 (-)
XLOC_036817 parapinopsina coding downstream 233336 53544094 ~ 53548145 (-)
XLOC_036823 BSN coding upstream 12170 53794022 ~ 53803429 (-)
XLOC_036824 CABZ01090219.1 coding upstream 59450 53841302 ~ 53851585 (-)
XLOC_036825 mib2 coding upstream 80893 53862745 ~ 53896982 (-)
XLOC_036826 ubiad1 coding upstream 136382 53918234 ~ 53926228 (-)
XLOC_036827 cdk11b coding upstream 166342 53948194 ~ 53960349 (-)
XLOC_036813 NA non-coding downstream 313778 53464218 ~ 53467703 (-)
XLOC_036812 CU914536.1 non-coding downstream 424585 53356779 ~ 53356896 (-)
XLOC_036807 NA non-coding downstream 846011 52933059 ~ 52935470 (-)
XLOC_036805 NA non-coding downstream 898705 52877822 ~ 52882776 (-)
XLOC_036801 NA non-coding downstream 1149997 52627507 ~ 52631484 (-)
XLOC_036829 NA non-coding upstream 279845 54061697 ~ 54068296 (-)
XLOC_036830 NA non-coding upstream 288309 54070161 ~ 54075099 (-)
XLOC_036832 NA non-coding upstream 330177 54112029 ~ 54113768 (-)
XLOC_036833 NA non-coding upstream 385201 54167053 ~ 54168171 (-)

Expression


Co-expression Network