XLOC_036801


Basic Information

Item Value
gene id XLOC_036801
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 52627507 ~ 52631484 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072559
cggacgcgcgcgagaccaaccgtcaagtagagaggcttcgGCTGACAGCAGGCGAAGATCGTCCTCTCTTAGCTCTGCAGAAACTCTTACTGCATCTGCAGGTCTGGATCCACATGACGCTTCTCGTGATGTTTTCTCCATCCGGACAGCGGAAACGCATGCGCACTGTGCGGGTCGAGCGCGGCTGACAGCATCGGTCGTCCACACATGAGCCGCAGGACCGAGGACGGTACCGGCGAACCGTGGAGCAGCCTGCAAACGTGATCAGCTCCGGCTTACGAGGTCTTGTTGTACGTCGACACTTCTTTCCTTTCTAAATGACAAAATGAAGCAACAAGAATATGTTAAAGGAGTGTTCACACCAAGGAGGACGactataaatataacataaactATTTGTGTACACACCACTAAACAATAATGAGGATCTGCTCATTTTTAGTTTAATAGTTTCTCTTTAATTCCCTTTTGTAACCAGCAGGTGTCCTCGTGAACCggtgaatccagctcgtgtaatctAATTACTAGTAACGTTTTAAAATACAACAAAGATTATTTCTAAGTAATATTTTGTGTCAGTCTGAACATGAATGAAAAGCCAACATGACGGAGTGAATGCTGTATTAATGTTCACCTTCAGATGTGGAGTGGCGTCACACGGTGTGATCTGGCAGAGGCGAGTCTCTCTGATTAACC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072559 True 696 lncRNA 0.47 2 52627507 52631484

Neighbor

gene id symbol gene type direction distance location
XLOC_036800 si:ch73-199g24.2 coding downstream 33396 52550241 ~ 52594111 (-)
XLOC_036799 phyhip coding downstream 154453 52453146 ~ 52473054 (-)
XLOC_036798 COX5B coding downstream 214475 52408583 ~ 52413032 (-)
XLOC_036797 NA coding downstream 222361 52401657 ~ 52405146 (-)
XLOC_036796 NA coding downstream 316880 52297701 ~ 52310627 (-)
XLOC_036802 tubb2b coding upstream 81748 52713232 ~ 52715911 (-)
XLOC_036803 fgf17 coding upstream 100623 52732107 ~ 52745168 (-)
XLOC_036804 nr5a1a coding upstream 201959 52833443 ~ 52871056 (-)
XLOC_036805 NA coding upstream 246338 52877822 ~ 52882776 (-)
XLOC_036806 nr6a1a coding upstream 256811 52888295 ~ 53044300 (-)
XLOC_036793 NA non-coding downstream 639160 51986810 ~ 51988347 (-)
XLOC_036781 NA non-coding downstream 1414839 51212413 ~ 51212668 (-)
XLOC_036779 CR855300.2 non-coding downstream 1599554 51027839 ~ 51027953 (-)
XLOC_036807 NA non-coding upstream 301575 52933059 ~ 52935470 (-)
XLOC_036812 CU914536.1 non-coding upstream 725295 53356779 ~ 53356896 (-)
XLOC_036813 NA non-coding upstream 832734 53464218 ~ 53467703 (-)
XLOC_036822 NA non-coding upstream 1149997 53781481 ~ 53781852 (-)

Expression


Co-expression Network