XLOC_036793


Basic Information

Item Value
gene id XLOC_036793
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 51986810 ~ 51988347 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072542
ACGGTTTTTTATCTCGTTTTACGCctcaacaactaaatgaatgtACCTACAGAGGACTGAAGAAAACCCATCCACATCTAATCCATTAGAAACGTCCATAAACGAGTTCAGCAACAGAAGAGTGTTGGGTTATTTTGAGCTCTACATCTACCCAGGAGCGAGTTGCAGCTTTCAGACCAGGTTGAACTCTTTGAGGTTGTGTCTCAGGATTGTGTCTTTAACCGCGGCAAAGATCAGCCGGATGTTCTCGGTGTCTGTGGCGCAGGTGAAGTGAGAATAGATGGTTTTGTCCTTGTCTTCATTCTCCTCCTGGTACATCTTCAGAATAAACTCCTGCGCCGCCTTTGGGTCATTTTTGg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072542 True 359 lncRNA 0.45 2 51986810 51988347

Neighbor

gene id symbol gene type direction distance location
XLOC_036792 cep78 coding downstream 32212 51933983 ~ 51954598 (-)
XLOC_036791 si:ch73-313l22.2 coding downstream 53148 51779734 ~ 51933662 (-)
XLOC_036790 tbx16 coding downstream 233206 51733907 ~ 51753604 (-)
XLOC_036789 npy8br coding downstream 350880 51634803 ~ 51635930 (-)
XLOC_036788 kctd9a coding downstream 387641 51586483 ~ 51599169 (-)
XLOC_036794 vps13a coding upstream 3997 51992344 ~ 52091696 (-)
XLOC_036795 tcf7l1b coding upstream 118471 52106818 ~ 52230115 (-)
XLOC_036796 NA coding upstream 309354 52297701 ~ 52310627 (-)
XLOC_036797 NA coding upstream 413310 52401657 ~ 52405146 (-)
XLOC_036798 COX5B coding upstream 420236 52408583 ~ 52413032 (-)
XLOC_036781 NA non-coding downstream 774142 51212413 ~ 51212668 (-)
XLOC_036779 CR855300.2 non-coding downstream 958857 51027839 ~ 51027953 (-)
XLOC_036777 NA non-coding downstream 1032566 50953658 ~ 50954244 (-)
XLOC_036776 FO704819.1 non-coding downstream 1088453 50889589 ~ 50898357 (-)
XLOC_036773 CABZ01060030.1 non-coding downstream 1468907 50517782 ~ 50517903 (-)
XLOC_036801 NA non-coding upstream 639160 52627507 ~ 52631484 (-)
XLOC_036805 NA non-coding upstream 889475 52877822 ~ 52882776 (-)
XLOC_036807 NA non-coding upstream 944712 52933059 ~ 52935470 (-)

Expression


Co-expression Network