G1758551


Basic Information

Item Value
gene id G1758551
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 59949980 ~ 59950224 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2013646
ctaggggtcttacGTTATGACGTCTTGGGCCTAGTTAACTGGTCTGGAACCTGAATGAATGGGTGCATTTATATGAGAAATCAGCATATGCGCCTAGGTGTTGAATGAACATGTGCCCAGGGAGGCGGCAACCTTAGCTATGTCCGGAGGCAGCTCTGTCTTGACTCCTTTGGGTCGGTGAGCCCAAGCTGATCATTAAGTTCAGATGGTGACGGAAACAGATATATACAAAAATGAAAACAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2013646 True 245 lncRNA 0.47 1 59949980 59950224

Neighbor

gene id symbol gene type direction distance location
LOC110500791 LOC106608487 coding upstream 55394 59886153 ~ 59894586 (+)
trnay-gua-289 NA coding upstream 89526 59860368 ~ 59860454 (+)
trnay-gua-288 NA coding upstream 90202 59859692 ~ 59859778 (+)
trnay-gua-287 NA coding upstream 90878 59859016 ~ 59859102 (+)
trnay-gua-286 NA coding upstream 91555 59858339 ~ 59858425 (+)
LOC110500789 LOC106608496 coding downstream 85862 60036086 ~ 60055603 (+)
LOC110500904 NA coding downstream 119497 60005761 ~ 60123961 (+)
LOC118942813 LOC106608496 coding downstream 135816 60086040 ~ 60090150 (+)
LOC118942961 LOC106608493 coding downstream 139669 60089893 ~ 60110374 (+)
LOC110500788 LOC106608498 coding downstream 174791 60125015 ~ 60129635 (+)
G1758544 NA non-coding upstream 17743 59931206 ~ 59932237 (+)
G1758537 NA non-coding upstream 29571 59920078 ~ 59920409 (+)
G1758538 NA non-coding upstream 33962 59915595 ~ 59916018 (+)
G1758527 stl1 non-coding upstream 44340 59896429 ~ 59905640 (+)
G1758514 NA non-coding upstream 82382 59867005 ~ 59867598 (+)
G1758526 NA non-coding downstream 7599 59957823 ~ 59959115 (+)
G1758665 NA non-coding downstream 55209 60005433 ~ 60005666 (+)
G1758673 NA non-coding downstream 66024 60016248 ~ 60021291 (+)
G1757578 NA other upstream 1263457 58683137 ~ 58686523 (+)
rwdd rwdd4 other upstream 1539901 58405236 ~ 58411726 (+)
G1756789 NA other upstream 2021736 57926480 ~ 57928244 (+)
G1755570 NA other upstream 3155406 56793731 ~ 56794574 (+)
G1755158 NA other upstream 3562358 56386407 ~ 56387622 (+)
G1758801 NA other downstream 371991 60322215 ~ 60326620 (+)
G1758818 NA other downstream 401422 60351646 ~ 60353092 (+)
G1758786 NA other downstream 408606 60358349 ~ 60359351 (+)
G1759168 LOC101154678 other downstream 771934 60722158 ~ 60722472 (+)
G1759267 NA other downstream 859978 60810202 ~ 60810620 (+)

Expression


Co-expression Network