G1759309


Basic Information

Item Value
gene id G1759309
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 60919123 ~ 60931977 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2014615
cctctccctccccctgccatGTATCATGTCTGCAGTCAGGCTGTGCTTTCGAGGACCGAGAGAATAGAATGAAAGGAGATAGAAAGGGGCATGAAAAGGAGATGGGAAAAGAGAGAGCAGTCCTCTCCACTAACCTACGCCACCCTTCATTTTTATCTGTCTCTCTAGAGTTCTGATAATTATACGTTCCTATGTTACAGGGAATAAAatctctccctctatctctctctgcacacacacacgcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2014615 True 246 lncRNA 0.47 2 60919123 60931977

Neighbor

gene id symbol gene type direction distance location
LOC118942964 NA coding upstream 109439 60808485 ~ 60809684 (+)
LOC118942963 NA coding upstream 115585 60802393 ~ 60803538 (+)
LOC118942966 NA coding upstream 139281 60778559 ~ 60779842 (+)
LOC118942965 NA coding upstream 144986 60749006 ~ 60774137 (+)
LOC110500798 LOC106608478 coding upstream 265017 60632412 ~ 60654106 (+)
LOC110531293 LOC108431879 coding downstream 793848 61725825 ~ 61804491 (+)
LOC118942795 NA coding downstream 1054489 61984438 ~ 61987741 (+)
LOC110512266 NA coding downstream 1060794 61992771 ~ 61994235 (+)
LOC118942970 NA coding downstream 1096228 62027815 ~ 62032638 (+)
LOC118942796 LOC106578155 coding downstream 1136417 62068394 ~ 62076250 (+)
G1759275 NA non-coding upstream 27222 60891442 ~ 60891901 (+)
G1759290 NA non-coding upstream 57474 60861380 ~ 60861649 (+)
G1759266 NA non-coding upstream 109064 60809827 ~ 60810059 (+)
G1759257 NA non-coding upstream 153887 60764845 ~ 60765236 (+)
G1759256 NA non-coding upstream 159448 60759335 ~ 60759675 (+)
G1759268 NA non-coding downstream 8498 60940475 ~ 60941003 (+)
G1759311 NA non-coding downstream 9328 60941305 ~ 60941756 (+)
G1759313 NA non-coding downstream 11708 60943685 ~ 60944142 (+)
G1759314 NA non-coding downstream 15720 60947697 ~ 60948051 (+)
G1759315 NA non-coding downstream 16713 60948690 ~ 60948933 (+)
G1759267 NA other upstream 108503 60810202 ~ 60810620 (+)
G1759168 LOC101154678 other upstream 196651 60722158 ~ 60722472 (+)
G1758786 NA other upstream 559772 60358349 ~ 60359351 (+)
G1758818 NA other upstream 566089 60351646 ~ 60353092 (+)
G1758801 NA other upstream 592503 60322215 ~ 60326620 (+)
G1760504 NA other downstream 1803074 62689513 ~ 62741819 (+)
G1760587 NA other downstream 1879798 62811775 ~ 62814241 (+)
LOC110500953 LOC106594432 other downstream 1941704 62873681 ~ 62903536 (+)
LOC110500813 tsc22d4 other downstream 2059193 62991115 ~ 63050683 (+)
G1760800 NA other downstream 2278156 63210133 ~ 63215753 (+)

Expression


Co-expression Network