LOC110512266


Basic Information

Item Value
gene id LOC110512266
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 61992771 ~ 61994235 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021592755.2
GTAAATGCAGCCATAGAACAGTTTATGCAAACCAACCCTCCTTGTTCTATCTTGACACCTGGAGGAGTTGTCTCTGAAAACGACTGGTCACTGCAACTTCATCTTTGTCTCTGTGGTGTCTTCATGTGATGATGGGGGTATTGAAgcatctctctgctctcctccttttctcaTCCCTTCATAGTGCGCTCTCTGAGGTGGTGGTGAAGTTCGATCCAAAGTGCAAGGGGTTCTTCCTGGATGAGAAGACTCCAAATATTTCGGGTATTTTGCTTGATGGGACTGCACAGAACCATTACAAACCGATTTGCCAGTTGTTCAACAATGTCTACCGGTATGCAACTCTTTATGACACAGCCAACAGGATCCCTGTGTTCTCAGCCTACACCTTCATCGGTACTGGGGGCGACAGCATCAAAAGACCGGCATGGAAGATAGAACCACAGCTGGATGAAGAGACAGATCCCAATATGGCACTGGCTACCCCGGGAATCAATTACCCAAATCAGGCTGTCAAAGAAGACTATGTTGGGGCAGAGGACACACACAAGGTGAACAGAGGTCACATGTTTCCAAATGAGCATGCGAGTGATACAGAAAGCAAGAATTCCACCTTCACCTTAACCAACTGCGTTCCGCAAGCAGTGTCCTCAAATGCGTTTAGCTGGTGTAACATGGAGAAAAGTGTCAAAAAGATTCTTGAGAACAACTGTAAGGACGCCAACAACAAGATAAAAGCCTATGTGGTGACCGGAGCGGTGCCCAGTAACGGCAACACACTGAAGAACCGGGTGAACATCCCATCTCACCTGTGGTCTGCCTATTGTTGTTACAACAGAAACCTGGAGAAGTGGATGGCCAAGGCCTATTGGAGCGAGAATGTTCCAGAGGTGTGTGGGAAAAAAAGGTTGAAACCACTTGCGTTGACAGATCTGTATGAAAAGCTGAACGTAATCTATCCCGGAGGCGAAGTCAGTGTATTTCCCCAGCAGTGTTCAAGTGATTTCCAGCTCAGGTTAGCAGGTGAATATTTAGATTTGGATGGGAAGGACGGAGGAAGAGATGGGCAAGAAGAGGATGATGAGTGTGCCTGTCCTTCTGGAAAGACTGTGAAACAGGTAGAGAACTGAATCCAGCTGCCGGACAAATGCACGATATTGACCGCAAATAGCCTAAATAGATATTGTATTTGACAATAATAAACTGTAATAATTTCAAACATTGATTACATAGATGCAATCAAGATGTTTCTGTATATATTAATGGGAATAATTGAGGACTTCCTTGATTAAAATAATTTTACCTGAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021592755.2 True 1308 mRNA 0.45 2 61992771 61994235

Neighbor

gene id symbol gene type direction distance location
LOC118942795 NA coding upstream 5067 61984438 ~ 61987741 (+)
LOC110531293 LOC108431879 coding upstream 188280 61725825 ~ 61804491 (+)
LOC110500905 LOC106608450 coding upstream 1068680 60900777 ~ 60924091 (+)
LOC118942964 NA coding upstream 1183087 60808485 ~ 60809684 (+)
LOC118942963 NA coding upstream 1189233 60802393 ~ 60803538 (+)
LOC118942970 NA coding downstream 33970 62027815 ~ 62032638 (+)
LOC118942796 LOC106578155 coding downstream 74159 62068394 ~ 62076250 (+)
fga LOC106608433 coding downstream 224381 62218616 ~ 62246175 (+)
rnf175 rnf175 coding downstream 278000 62272235 ~ 62305912 (+)
LOC118942972 LOC106592795 coding downstream 410671 62404906 ~ 62442938 (+)
G1759908 NA non-coding upstream 10457 61981980 ~ 61982314 (+)
G1759907 NA non-coding upstream 12349 61980178 ~ 61980422 (+)
G1759906 NA non-coding upstream 14238 61978315 ~ 61978533 (+)
G1759905 NA non-coding upstream 14634 61977827 ~ 61978137 (+)
G1759887 NA non-coding downstream 566 61994801 ~ 62049795 (+)
G1759895 NA non-coding downstream 876 61995111 ~ 62038037 (+)
G1759915 NA non-coding downstream 12276 62006511 ~ 62009141 (+)
G1759916 NA non-coding downstream 15034 62009269 ~ 62009692 (+)
G1759267 NA other upstream 1182151 60810202 ~ 60810620 (+)
G1759168 LOC101154678 other upstream 1270299 60722158 ~ 60722472 (+)
G1758786 NA other upstream 1633420 60358349 ~ 60359351 (+)
G1758818 NA other upstream 1639737 60351646 ~ 60353092 (+)
G1758801 NA other upstream 1666151 60322215 ~ 60326620 (+)
G1760504 NA other downstream 740816 62689513 ~ 62741819 (+)
G1760587 NA other downstream 817540 62811775 ~ 62814241 (+)
LOC110500953 LOC106594432 other downstream 879446 62873681 ~ 62903536 (+)
LOC110500813 tsc22d4 other downstream 996935 62991115 ~ 63050683 (+)
G1760800 NA other downstream 1215898 63210133 ~ 63215753 (+)

Expression


Co-expression Network