G1759915


Basic Information

Item Value
gene id G1759915
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 62006511 ~ 62009141 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2015438
gcggcttttgtggagcgatgggtaaacgatgctttgtgggtgactgttgttgatgtgtgcagagggtccctggttcgcgcccgggtcggggcgaggggacggactaaaaagttatactgttacattgacacaaaccggtgcgcctggaacATACCAaccctgttcaaaagcacttcaatattttgtcttgacctttcaccctctgaatggcaacacatacacactccatgtctcaatagtttcaaggcttaaaaatccttctttaacccgtctcctccacttcatctacactgactgaagtggatttaacaagtgacatcaataagggatcatagttttaaacctggattcacctggtcagtctgtgtggaaagagcaggtgttcctaatgttttgtacactcagtgtgcgTACAGGtagtagacctgggttcaaatactattcgacATAATTTCAGAAAAAGTATCTAGGCTTGATTGAGCTTCTcgacattaaaaaaaataaaaaaataaatagaaaagtCCCAAAAGTACAAACCCTGGCCATCTGGCATTCGAGGCGGACTGAAGCAAACGCTCAAatcatttcaaactacttttaaaAAGTATTTGAACCCCAGGTCTGATCTGTAAGGTAGGTAAAACGTttaaccacaaacacacacaggtagagATGGAAAGTAGTCTATATGAATAAATCATGTTCAGATTCATCTTCCCTCACAGTCAACAACCGAAGTGATTCCTTCACCGAGACAaattctgactgtgtgtgtggtagtgtgtgtggttgtggtagtggtagtgtgtgtggtagtgtgtggtagtggtagtgtgtgtggtagtggtagtggtagtgtgtgtggtagtgtgtgtggtagtgtgtgtggtagtggtagtggtagtgtgtgtggtagtgtgtgcggtagtggtagtggtagtgtgtgtggtagtgtgtgcggtagtggtagtgtgtgtggtagtgtgtgtggtagtggtagtgtgtgcggtagtgtgtgtggtagtggtagtgtgtgcgGTAGTGTgtgcggtagtgggtgtggtagtgtggtagtggGTGTGGtagtgggagtgtgtgtggtagtgtggtagtgggtgtggtagtggtagtgtgtgtggtagtgtgtgtggtagtgtggtagtgggtgtggtagtggtagtgtgtgcgGTAGTGTGTGTAACAAGTCAGAATACATCAGTAGTATAATCAGTAATATCGTATCAAATACTGTAACCCTAACCTTCCCTCAACCCTAACCTTCCCTCAACCCTAACCTTCCCTCAACATCTAAAACTAACCTTCCCTCAACATCTAAAACTAACCTTCCCTCAACATCTAAAACTAACCTTCCCTCAACCCTAACCTTCCCTCAACATCTAAAACTAACCTTCCCTCAACCCTAACCTTCCCTCAACATCTAAAACTAACCTTCCCTCAACCCTAACCTTCCCTCAACATCTAAAACTAACCTTCCCTCAACATCTAAAACTAACCTTCCCTCAACATCTAAAACTAACCTTCCCTCAACATCTAAAACTAACCTTCCCTCAACATCTAAAACTAACCTTCCCTCAACCCTAACCTTCCCTCAACATCTAAAACTAACCTTCCCTCAACATCTAAAACTAACCTTCCCTCAACATTGTAACGAATTGCGATTAACTAAACGCCACGAATTAAATGAATCATTTGACAGCCCTAATTATATGATGGCCGTAACGTAACCACAACGTTGAAGGAATGTTAAAACGCTGTCGTCACAGAATGTTGTTTGAAGGTTGTGGGAACGTTACACATCATAATCCGGAACAGCCGAGTAGCTGATTCCACCGACGGTGGGGGGACTGGAATGTAGAGGGAACAGCCAACAGAAC

Function

NR:

description
PREDICTED: melanoma-associated antigen C1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2015438 True 1895 lncRNA 0.44 4 62006511 62009141

Neighbor

gene id symbol gene type direction distance location
LOC110512266 NA coding upstream 12276 61992771 ~ 61994235 (+)
LOC118942795 NA coding upstream 18807 61984438 ~ 61987741 (+)
LOC110531293 LOC108431879 coding upstream 202020 61725825 ~ 61804491 (+)
LOC110500905 LOC106608450 coding upstream 1082420 60900777 ~ 60924091 (+)
LOC118942964 NA coding upstream 1196827 60808485 ~ 60809684 (+)
LOC118942970 NA coding downstream 19064 62027815 ~ 62032638 (+)
LOC118942796 LOC106578155 coding downstream 59253 62068394 ~ 62076250 (+)
fga LOC106608433 coding downstream 209475 62218616 ~ 62246175 (+)
rnf175 rnf175 coding downstream 263094 62272235 ~ 62305912 (+)
LOC118942972 LOC106592795 coding downstream 395765 62404906 ~ 62442938 (+)
G1759908 NA non-coding upstream 24197 61981980 ~ 61982314 (+)
G1759907 NA non-coding upstream 26089 61980178 ~ 61980422 (+)
G1759906 NA non-coding upstream 27978 61978315 ~ 61978533 (+)
G1759905 NA non-coding upstream 28374 61977827 ~ 61978137 (+)
G1759916 NA non-coding downstream 128 62009269 ~ 62009692 (+)
G1759933 NA non-coding downstream 67269 62076410 ~ 62076658 (+)
G1759934 NA non-coding downstream 67938 62077079 ~ 62077565 (+)
G1759937 NA non-coding downstream 70367 62079508 ~ 62079888 (+)
G1759267 NA other upstream 1195891 60810202 ~ 60810620 (+)
G1759168 LOC101154678 other upstream 1284039 60722158 ~ 60722472 (+)
G1758786 NA other upstream 1647160 60358349 ~ 60359351 (+)
G1758818 NA other upstream 1653477 60351646 ~ 60353092 (+)
G1758801 NA other upstream 1679891 60322215 ~ 60326620 (+)
G1760504 NA other downstream 725910 62689513 ~ 62741819 (+)
G1760587 NA other downstream 802634 62811775 ~ 62814241 (+)
LOC110500953 LOC106594432 other downstream 864540 62873681 ~ 62903536 (+)
LOC110500813 tsc22d4 other downstream 982029 62991115 ~ 63050683 (+)
G1760800 NA other downstream 1200992 63210133 ~ 63215753 (+)

Expression


Co-expression Network