G1760947


Basic Information

Item Value
gene id G1760947
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 63555116 ~ 63555652 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2016952
ctgatatacacacacacctggtacacacacaccatatacacacacaccatatacacacacacctgatacacacggcagtgtagcctagtggttagagcgttggactagtaaccgaatcTGAAATGAAGGCAGCCAGACATCTGGAATGAAGGCAGACATACATCTGGAatgaaggcagacagacagacatctgaaATGAAGGCAGAAAGACATCTGGAAGGAAGGCAGACAGACATCTGGAAGGAAGGCAGACAGACATCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2016952 True 263 lncRNA 0.47 2 63555116 63555652

Neighbor

gene id symbol gene type direction distance location
LOC118942978 NA coding upstream 20554 63528908 ~ 63534562 (+)
si:ch73-265d7.2 NA coding upstream 182903 63363590 ~ 63372213 (+)
LOC110500814 LOC100194636 coding upstream 211502 63329511 ~ 63343614 (+)
pfn1 prof1 coding upstream 237595 63307806 ~ 63317521 (+)
LOC118942976 NA coding upstream 316809 63232777 ~ 63238307 (+)
LOC110503296 LOC106592207 coding downstream 53019 63608671 ~ 63655491 (+)
zgc:158659 pik3ca coding downstream 108371 63664023 ~ 63813757 (+)
ctc1 LOC106595900 coding downstream 276903 63832555 ~ 63879982 (+)
tfr2 LOC106592655 coding downstream 337542 63893194 ~ 64066184 (+)
LOC110510008 LOC106562799 coding downstream 992290 64547942 ~ 64579984 (+)
G1760946 NA non-coding upstream 41 63554116 ~ 63555075 (+)
G1760910 NA non-coding upstream 36112 63518089 ~ 63519004 (+)
G1760906 NA non-coding upstream 52155 63502720 ~ 63502961 (+)
G1760902 NA non-coding upstream 57605 63496200 ~ 63497511 (+)
G1760955 NA non-coding downstream 7874 63563526 ~ 63564845 (+)
G1760957 NA non-coding downstream 15679 63571331 ~ 63575327 (+)
G1760968 NA non-coding downstream 41472 63597124 ~ 63597733 (+)
G1760973 NA non-coding downstream 51630 63607282 ~ 63607640 (+)
G1760992 NA non-coding downstream 99950 63655602 ~ 63656129 (+)
G1760941 NA other upstream 3624 63549905 ~ 63551492 (+)
G1760865 NA other upstream 136857 63396272 ~ 63418259 (+)
G1760800 NA other upstream 339363 63210133 ~ 63215753 (+)
LOC110500813 tsc22d4 other upstream 526676 62991115 ~ 63050683 (+)
G1761231 NA other downstream 861785 64417437 ~ 64418064 (+)
LOC110500801 LOC106608413 other downstream 1179056 64734656 ~ 64754522 (+)
LOC118942983 NA other downstream 1198977 64754608 ~ 64760958 (+)
LOC110517355 NA other downstream 1250994 64806646 ~ 64842255 (+)

Expression


Co-expression Network